Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cchcr1Q8K2I2 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cchcr1Q8K2I2 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC15.56■□□□□ 0.08
Cchcr1Q8K2I2 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cchcr1Q8K2I2 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Cchcr1Q8K2I2 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cchcr1Q8K2I2 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cchcr1Q8K2I2 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Cchcr1Q8K2I2 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC15.56■□□□□ 0.08
Cchcr1Q8K2I2 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Cchcr1Q8K2I2 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
Cchcr1Q8K2I2 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC15.56■□□□□ 0.08
Cchcr1Q8K2I2 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cchcr1Q8K2I2 AC124732.1-201ENSMUST00000221551 910 ntBASIC15.56■□□□□ 0.08
Cchcr1Q8K2I2 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cchcr1Q8K2I2 AC138604.1-201ENSMUST00000226969 739 ntBASIC15.56■□□□□ 0.08
Cchcr1Q8K2I2 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Cchcr1Q8K2I2 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cchcr1Q8K2I2 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cchcr1Q8K2I2 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cchcr1Q8K2I2 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC15.56■□□□□ 0.08
Cchcr1Q8K2I2 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cchcr1Q8K2I2 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC15.56■□□□□ 0.08
Cchcr1Q8K2I2 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cchcr1Q8K2I2 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC15.56■□□□□ 0.08
Cchcr1Q8K2I2 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cchcr1Q8K2I2 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cchcr1Q8K2I2 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cchcr1Q8K2I2 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cchcr1Q8K2I2 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cchcr1Q8K2I2 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Cchcr1Q8K2I2 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Cchcr1Q8K2I2 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cchcr1Q8K2I2 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cchcr1Q8K2I2 Kcnk16-202ENSMUST00000225596 2127 ntBASIC15.55■□□□□ 0.08
Cchcr1Q8K2I2 Gm10040-201ENSMUST00000080726 1662 ntBASIC15.55■□□□□ 0.08
Cchcr1Q8K2I2 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cchcr1Q8K2I2 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cchcr1Q8K2I2 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Cchcr1Q8K2I2 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cchcr1Q8K2I2 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cchcr1Q8K2I2 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Cchcr1Q8K2I2 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cchcr1Q8K2I2 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC15.55■□□□□ 0.08
Cchcr1Q8K2I2 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cchcr1Q8K2I2 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Cchcr1Q8K2I2 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Cchcr1Q8K2I2 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cchcr1Q8K2I2 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cchcr1Q8K2I2 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cchcr1Q8K2I2 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC15.55■□□□□ 0.08
Cchcr1Q8K2I2 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Cchcr1Q8K2I2 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Cchcr1Q8K2I2 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
Cchcr1Q8K2I2 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cchcr1Q8K2I2 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cchcr1Q8K2I2 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cchcr1Q8K2I2 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cchcr1Q8K2I2 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cchcr1Q8K2I2 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Cchcr1Q8K2I2 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cchcr1Q8K2I2 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cchcr1Q8K2I2 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cchcr1Q8K2I2 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC15.54■□□□□ 0.08
Cchcr1Q8K2I2 Gm28631-201ENSMUST00000190740 334 ntBASIC15.54■□□□□ 0.08
Cchcr1Q8K2I2 Gm7558-201ENSMUST00000193221 1165 ntBASIC15.54■□□□□ 0.08
Cchcr1Q8K2I2 AC132467.2-202ENSMUST00000227726 559 ntBASIC15.54■□□□□ 0.08
Cchcr1Q8K2I2 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC15.54■□□□□ 0.08
Cchcr1Q8K2I2 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Cchcr1Q8K2I2 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cchcr1Q8K2I2 AC154747.3-201ENSMUST00000224471 3470 ntBASIC15.54■□□□□ 0.08
Cchcr1Q8K2I2 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cchcr1Q8K2I2 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cchcr1Q8K2I2 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Cchcr1Q8K2I2 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
Cchcr1Q8K2I2 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Cchcr1Q8K2I2 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Cchcr1Q8K2I2 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cchcr1Q8K2I2 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Cchcr1Q8K2I2 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Cchcr1Q8K2I2 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Cchcr1Q8K2I2 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cchcr1Q8K2I2 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Cchcr1Q8K2I2 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cchcr1Q8K2I2 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC15.53■□□□□ 0.08
Cchcr1Q8K2I2 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cchcr1Q8K2I2 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cchcr1Q8K2I2 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cchcr1Q8K2I2 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cchcr1Q8K2I2 Gm13689-201ENSMUST00000119360 685 ntBASIC15.53■□□□□ 0.08
Cchcr1Q8K2I2 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
Cchcr1Q8K2I2 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC15.53■□□□□ 0.08
Cchcr1Q8K2I2 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC15.53■□□□□ 0.08
Cchcr1Q8K2I2 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC15.53■□□□□ 0.08
Cchcr1Q8K2I2 Gm44397-201ENSMUST00000195950 113 ntBASIC15.53■□□□□ 0.08
Cchcr1Q8K2I2 Gm18307-201ENSMUST00000206864 949 ntBASIC15.53■□□□□ 0.08
Cchcr1Q8K2I2 AC156560.2-201ENSMUST00000221232 264 ntBASIC15.53■□□□□ 0.08
Cchcr1Q8K2I2 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cchcr1Q8K2I2 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cchcr1Q8K2I2 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms