Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Alx1Q8C8B0 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
Alx1Q8C8B0 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Alx1Q8C8B0 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Alx1Q8C8B0 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Alx1Q8C8B0 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Alx1Q8C8B0 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Alx1Q8C8B0 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Alx1Q8C8B0 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Alx1Q8C8B0 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Alx1Q8C8B0 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Alx1Q8C8B0 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Alx1Q8C8B0 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Alx1Q8C8B0 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Alx1Q8C8B0 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Alx1Q8C8B0 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC15.3■□□□□ 0.04
Alx1Q8C8B0 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Alx1Q8C8B0 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Alx1Q8C8B0 Gm11591-201ENSMUST00000120063 702 ntBASIC15.3■□□□□ 0.04
Alx1Q8C8B0 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC15.3■□□□□ 0.04
Alx1Q8C8B0 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Alx1Q8C8B0 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Alx1Q8C8B0 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Alx1Q8C8B0 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Alx1Q8C8B0 Gm6222-202ENSMUST00000182143 629 ntBASIC15.3■□□□□ 0.04
Alx1Q8C8B0 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Alx1Q8C8B0 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC15.3■□□□□ 0.04
Alx1Q8C8B0 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC15.3■□□□□ 0.04
Alx1Q8C8B0 Gm8099-201ENSMUST00000200510 742 ntBASIC15.3■□□□□ 0.04
Alx1Q8C8B0 Gm43579-201ENSMUST00000202387 1307 ntBASIC15.3■□□□□ 0.04
Alx1Q8C8B0 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC15.3■□□□□ 0.04
Alx1Q8C8B0 Gm19309-201ENSMUST00000218295 205 ntBASIC15.3■□□□□ 0.04
Alx1Q8C8B0 Gm4935-201ENSMUST00000221316 1198 ntBASIC15.3■□□□□ 0.04
Alx1Q8C8B0 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC15.3■□□□□ 0.04
Alx1Q8C8B0 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Alx1Q8C8B0 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Alx1Q8C8B0 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Alx1Q8C8B0 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Alx1Q8C8B0 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Alx1Q8C8B0 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Alx1Q8C8B0 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Alx1Q8C8B0 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Alx1Q8C8B0 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Alx1Q8C8B0 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Alx1Q8C8B0 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Alx1Q8C8B0 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC15.29■□□□□ 0.04
Alx1Q8C8B0 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC15.29■□□□□ 0.04
Alx1Q8C8B0 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Alx1Q8C8B0 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Alx1Q8C8B0 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Alx1Q8C8B0 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Alx1Q8C8B0 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Alx1Q8C8B0 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Alx1Q8C8B0 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Alx1Q8C8B0 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Alx1Q8C8B0 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC15.29■□□□□ 0.04
Alx1Q8C8B0 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Alx1Q8C8B0 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Alx1Q8C8B0 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC15.29■□□□□ 0.04
Alx1Q8C8B0 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Alx1Q8C8B0 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC15.29■□□□□ 0.04
Alx1Q8C8B0 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC15.29■□□□□ 0.04
Alx1Q8C8B0 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC15.29■□□□□ 0.04
Alx1Q8C8B0 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Alx1Q8C8B0 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC15.29■□□□□ 0.04
Alx1Q8C8B0 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC15.29■□□□□ 0.04
Alx1Q8C8B0 Gm17823-201ENSMUST00000217830 1006 ntBASIC15.29■□□□□ 0.04
Alx1Q8C8B0 AC153962.4-201ENSMUST00000217878 242 ntBASIC15.29■□□□□ 0.04
Alx1Q8C8B0 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Alx1Q8C8B0 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Alx1Q8C8B0 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Alx1Q8C8B0 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Alx1Q8C8B0 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Alx1Q8C8B0 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Alx1Q8C8B0 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Alx1Q8C8B0 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Alx1Q8C8B0 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Alx1Q8C8B0 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Alx1Q8C8B0 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Alx1Q8C8B0 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Alx1Q8C8B0 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Alx1Q8C8B0 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Alx1Q8C8B0 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Alx1Q8C8B0 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Alx1Q8C8B0 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC15.28■□□□□ 0.04
Alx1Q8C8B0 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Alx1Q8C8B0 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
Alx1Q8C8B0 Gm8793-201ENSMUST00000183069 1303 ntBASIC15.28■□□□□ 0.04
Alx1Q8C8B0 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Alx1Q8C8B0 Gm22018-201ENSMUST00000104357 131 ntBASIC15.28■□□□□ 0.04
Alx1Q8C8B0 Gm12957-201ENSMUST00000117835 377 ntBASIC15.28■□□□□ 0.04
Alx1Q8C8B0 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC15.28■□□□□ 0.04
Alx1Q8C8B0 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC15.28■□□□□ 0.04
Alx1Q8C8B0 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Alx1Q8C8B0 n-R5s195-201ENSMUST00000082891 119 ntBASIC15.28■□□□□ 0.04
Alx1Q8C8B0 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Alx1Q8C8B0 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Alx1Q8C8B0 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Alx1Q8C8B0 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Alx1Q8C8B0 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 75.7 ms