Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trub1Q8C0D0 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trub1Q8C0D0 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trub1Q8C0D0 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trub1Q8C0D0 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trub1Q8C0D0 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trub1Q8C0D0 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trub1Q8C0D0 Gm16202-201ENSMUST00000117532 544 ntBASIC13.56□□□□□ -0.24
Trub1Q8C0D0 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC13.56□□□□□ -0.24
Trub1Q8C0D0 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Trub1Q8C0D0 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC13.56□□□□□ -0.24
Trub1Q8C0D0 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC13.56□□□□□ -0.24
Trub1Q8C0D0 Gm6745-201ENSMUST00000199216 526 ntBASIC13.56□□□□□ -0.24
Trub1Q8C0D0 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trub1Q8C0D0 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trub1Q8C0D0 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trub1Q8C0D0 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trub1Q8C0D0 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trub1Q8C0D0 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Trub1Q8C0D0 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trub1Q8C0D0 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trub1Q8C0D0 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trub1Q8C0D0 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC13.56□□□□□ -0.24
Trub1Q8C0D0 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Trub1Q8C0D0 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trub1Q8C0D0 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trub1Q8C0D0 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trub1Q8C0D0 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trub1Q8C0D0 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trub1Q8C0D0 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.55□□□□□ -0.24
Trub1Q8C0D0 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC13.55□□□□□ -0.24
Trub1Q8C0D0 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC13.55□□□□□ -0.24
Trub1Q8C0D0 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trub1Q8C0D0 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Trub1Q8C0D0 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC13.55□□□□□ -0.24
Trub1Q8C0D0 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trub1Q8C0D0 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trub1Q8C0D0 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trub1Q8C0D0 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trub1Q8C0D0 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Trub1Q8C0D0 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trub1Q8C0D0 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trub1Q8C0D0 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trub1Q8C0D0 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trub1Q8C0D0 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trub1Q8C0D0 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trub1Q8C0D0 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trub1Q8C0D0 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trub1Q8C0D0 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trub1Q8C0D0 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trub1Q8C0D0 Gm13612-201ENSMUST00000119276 390 ntBASIC13.55□□□□□ -0.24
Trub1Q8C0D0 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC13.55□□□□□ -0.24
Trub1Q8C0D0 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trub1Q8C0D0 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC13.55□□□□□ -0.24
Trub1Q8C0D0 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC13.55□□□□□ -0.24
Trub1Q8C0D0 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trub1Q8C0D0 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trub1Q8C0D0 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trub1Q8C0D0 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Trub1Q8C0D0 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trub1Q8C0D0 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trub1Q8C0D0 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trub1Q8C0D0 Gm45003-201ENSMUST00000205875 2158 ntBASIC13.55□□□□□ -0.24
Trub1Q8C0D0 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trub1Q8C0D0 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC13.55□□□□□ -0.24
Trub1Q8C0D0 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trub1Q8C0D0 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trub1Q8C0D0 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trub1Q8C0D0 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Trub1Q8C0D0 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
Trub1Q8C0D0 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Trub1Q8C0D0 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trub1Q8C0D0 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trub1Q8C0D0 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trub1Q8C0D0 AC121805.2-201ENSMUST00000218808 2538 ntBASIC13.54□□□□□ -0.24
Trub1Q8C0D0 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trub1Q8C0D0 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trub1Q8C0D0 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Trub1Q8C0D0 Gm15222-202ENSMUST00000228667 1726 ntBASIC13.54□□□□□ -0.24
Trub1Q8C0D0 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC13.54□□□□□ -0.24
Trub1Q8C0D0 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trub1Q8C0D0 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trub1Q8C0D0 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trub1Q8C0D0 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Trub1Q8C0D0 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Trub1Q8C0D0 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trub1Q8C0D0 Gm11918-201ENSMUST00000121660 179 ntBASIC13.54□□□□□ -0.24
Trub1Q8C0D0 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC13.54□□□□□ -0.24
Trub1Q8C0D0 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trub1Q8C0D0 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trub1Q8C0D0 H2-Pa-201ENSMUST00000182803 626 ntBASIC13.54□□□□□ -0.24
Trub1Q8C0D0 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trub1Q8C0D0 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trub1Q8C0D0 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC13.54□□□□□ -0.24
Trub1Q8C0D0 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC13.54□□□□□ -0.24
Trub1Q8C0D0 Gm7287-201ENSMUST00000205267 602 ntBASIC13.54□□□□□ -0.24
Trub1Q8C0D0 Gm8598-201ENSMUST00000221184 836 ntBASIC13.54□□□□□ -0.24
Trub1Q8C0D0 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trub1Q8C0D0 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trub1Q8C0D0 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms