Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Gm4482-201ENSMUST00000200876 742 ntBASIC10.84□□□□□ -0.67
Smg1Q8BKX6 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC10.84□□□□□ -0.67
Smg1Q8BKX6 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smg1Q8BKX6 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smg1Q8BKX6 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smg1Q8BKX6 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC10.84□□□□□ -0.67
Smg1Q8BKX6 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Smg1Q8BKX6 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smg1Q8BKX6 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smg1Q8BKX6 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smg1Q8BKX6 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Smg1Q8BKX6 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smg1Q8BKX6 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC10.84□□□□□ -0.67
Smg1Q8BKX6 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.67
Smg1Q8BKX6 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC10.83□□□□□ -0.67
Smg1Q8BKX6 Gm14274-201ENSMUST00000117182 615 ntBASIC10.83□□□□□ -0.67
Smg1Q8BKX6 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC10.83□□□□□ -0.67
Smg1Q8BKX6 AY036118-201ENSMUST00000200021 923 ntBASIC10.83□□□□□ -0.67
Smg1Q8BKX6 Nat8f6-201ENSMUST00000087656 925 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
Smg1Q8BKX6 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC10.83□□□□□ -0.67
Smg1Q8BKX6 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smg1Q8BKX6 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC10.83□□□□□ -0.68
Smg1Q8BKX6 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smg1Q8BKX6 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smg1Q8BKX6 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smg1Q8BKX6 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smg1Q8BKX6 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smg1Q8BKX6 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smg1Q8BKX6 Gm15711-201ENSMUST00000118889 535 ntBASIC10.83□□□□□ -0.68
Smg1Q8BKX6 Gm11979-201ENSMUST00000119629 743 ntBASIC10.83□□□□□ -0.68
Smg1Q8BKX6 Gm25604-201ENSMUST00000158359 133 ntBASIC10.83□□□□□ -0.68
Smg1Q8BKX6 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC10.83□□□□□ -0.68
Smg1Q8BKX6 Gm43520-201ENSMUST00000197996 164 ntBASIC10.83□□□□□ -0.68
Smg1Q8BKX6 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC10.83□□□□□ -0.68
Smg1Q8BKX6 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Smg1Q8BKX6 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Smg1Q8BKX6 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Smg1Q8BKX6 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smg1Q8BKX6 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC10.83□□□□□ -0.68
Smg1Q8BKX6 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smg1Q8BKX6 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smg1Q8BKX6 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smg1Q8BKX6 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smg1Q8BKX6 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smg1Q8BKX6 Gm25072-201ENSMUST00000175233 235 ntBASIC10.83□□□□□ -0.68
Smg1Q8BKX6 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC10.83□□□□□ -0.68
Smg1Q8BKX6 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC10.83□□□□□ -0.68
Smg1Q8BKX6 AC166344.1-202ENSMUST00000224139 234 ntBASIC10.83□□□□□ -0.68
Smg1Q8BKX6 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC10.83□□□□□ -0.68
Smg1Q8BKX6 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Smg1Q8BKX6 n-R5s77-201ENSMUST00000083757 119 ntBASIC10.83□□□□□ -0.68
Smg1Q8BKX6 Gm42928-201ENSMUST00000197338 3339 ntBASIC10.83□□□□□ -0.68
Smg1Q8BKX6 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smg1Q8BKX6 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smg1Q8BKX6 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smg1Q8BKX6 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smg1Q8BKX6 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Smg1Q8BKX6 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smg1Q8BKX6 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Smg1Q8BKX6 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC10.82□□□□□ -0.68
Smg1Q8BKX6 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smg1Q8BKX6 Gm5340-201ENSMUST00000203733 880 ntBASIC10.82□□□□□ -0.68
Smg1Q8BKX6 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC10.82□□□□□ -0.68
Smg1Q8BKX6 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC10.82□□□□□ -0.68
Smg1Q8BKX6 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Smg1Q8BKX6 Gm44291-201ENSMUST00000203102 2865 ntBASIC10.82□□□□□ -0.68
Smg1Q8BKX6 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smg1Q8BKX6 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC10.82□□□□□ -0.68
Smg1Q8BKX6 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC10.82□□□□□ -0.68
Smg1Q8BKX6 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Smg1Q8BKX6 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smg1Q8BKX6 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smg1Q8BKX6 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smg1Q8BKX6 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC10.82□□□□□ -0.68
Smg1Q8BKX6 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Smg1Q8BKX6 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC10.82□□□□□ -0.68
Smg1Q8BKX6 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Smg1Q8BKX6 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smg1Q8BKX6 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smg1Q8BKX6 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smg1Q8BKX6 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smg1Q8BKX6 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smg1Q8BKX6 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Smg1Q8BKX6 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smg1Q8BKX6 Gm14058-201ENSMUST00000116082 735 ntBASIC10.82□□□□□ -0.68
Smg1Q8BKX6 Marcksl1-ps4-201ENSMUST00000132531 291 ntBASIC10.82□□□□□ -0.68
Smg1Q8BKX6 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Smg1Q8BKX6 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC10.82□□□□□ -0.68
Smg1Q8BKX6 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smg1Q8BKX6 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC10.82□□□□□ -0.68
Smg1Q8BKX6 Gm26513-201ENSMUST00000181802 2489 ntBASIC10.82□□□□□ -0.68
Smg1Q8BKX6 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smg1Q8BKX6 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
Smg1Q8BKX6 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smg1Q8BKX6 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smg1Q8BKX6 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smg1Q8BKX6 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smg1Q8BKX6 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Smg1Q8BKX6 Gm21027-201ENSMUST00000219300 1236 ntBASIC10.81□□□□□ -0.68
Smg1Q8BKX6 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms