Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rnf38Q8BI21 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rnf38Q8BI21 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Rnf38Q8BI21 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rnf38Q8BI21 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rnf38Q8BI21 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rnf38Q8BI21 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rnf38Q8BI21 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Rnf38Q8BI21 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rnf38Q8BI21 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Rnf38Q8BI21 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rnf38Q8BI21 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rnf38Q8BI21 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf38Q8BI21 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf38Q8BI21 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf38Q8BI21 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.72□□□□□ -0.37
Rnf38Q8BI21 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf38Q8BI21 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Rnf38Q8BI21 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf38Q8BI21 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf38Q8BI21 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf38Q8BI21 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf38Q8BI21 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf38Q8BI21 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf38Q8BI21 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf38Q8BI21 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf38Q8BI21 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC12.72□□□□□ -0.37
Rnf38Q8BI21 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf38Q8BI21 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf38Q8BI21 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.72□□□□□ -0.37
Rnf38Q8BI21 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf38Q8BI21 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf38Q8BI21 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf38Q8BI21 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf38Q8BI21 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf38Q8BI21 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Rnf38Q8BI21 Gm5161-201ENSMUST00000075243 853 ntBASIC12.72□□□□□ -0.37
Rnf38Q8BI21 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf38Q8BI21 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf38Q8BI21 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf38Q8BI21 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf38Q8BI21 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf38Q8BI21 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf38Q8BI21 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf38Q8BI21 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf38Q8BI21 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf38Q8BI21 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf38Q8BI21 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf38Q8BI21 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Rnf38Q8BI21 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf38Q8BI21 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf38Q8BI21 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf38Q8BI21 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf38Q8BI21 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf38Q8BI21 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf38Q8BI21 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf38Q8BI21 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf38Q8BI21 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Rnf38Q8BI21 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf38Q8BI21 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf38Q8BI21 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf38Q8BI21 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC12.71□□□□□ -0.37
Rnf38Q8BI21 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf38Q8BI21 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf38Q8BI21 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf38Q8BI21 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf38Q8BI21 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf38Q8BI21 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf38Q8BI21 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf38Q8BI21 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf38Q8BI21 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf38Q8BI21 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf38Q8BI21 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Rnf38Q8BI21 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf38Q8BI21 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf38Q8BI21 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf38Q8BI21 Gm14057-201ENSMUST00000120631 482 ntBASIC12.71□□□□□ -0.37
Rnf38Q8BI21 Gm15487-201ENSMUST00000122373 465 ntBASIC12.71□□□□□ -0.37
Rnf38Q8BI21 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC12.71□□□□□ -0.37
Rnf38Q8BI21 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf38Q8BI21 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf38Q8BI21 Gm27838-201ENSMUST00000184829 128 ntBASIC12.71□□□□□ -0.37
Rnf38Q8BI21 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC12.71□□□□□ -0.37
Rnf38Q8BI21 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC12.71□□□□□ -0.37
Rnf38Q8BI21 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC12.71□□□□□ -0.37
Rnf38Q8BI21 AC158982.1-201ENSMUST00000228377 901 ntBASIC12.71□□□□□ -0.37
Rnf38Q8BI21 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf38Q8BI21 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf38Q8BI21 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC12.71□□□□□ -0.37
Rnf38Q8BI21 Gm9544-201ENSMUST00000223349 2482 ntBASIC12.71□□□□□ -0.37
Rnf38Q8BI21 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Rnf38Q8BI21 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Rnf38Q8BI21 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.71□□□□□ -0.38
Rnf38Q8BI21 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Rnf38Q8BI21 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rnf38Q8BI21 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
Rnf38Q8BI21 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rnf38Q8BI21 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rnf38Q8BI21 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rnf38Q8BI21 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms