Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clrn3Q8BHH8 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Clrn3Q8BHH8 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clrn3Q8BHH8 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clrn3Q8BHH8 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clrn3Q8BHH8 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clrn3Q8BHH8 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clrn3Q8BHH8 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Clrn3Q8BHH8 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Clrn3Q8BHH8 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clrn3Q8BHH8 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clrn3Q8BHH8 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clrn3Q8BHH8 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clrn3Q8BHH8 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clrn3Q8BHH8 Gm12537-201ENSMUST00000119266 1002 ntBASIC12.39□□□□□ -0.43
Clrn3Q8BHH8 Gm12070-201ENSMUST00000119551 1002 ntBASIC12.39□□□□□ -0.43
Clrn3Q8BHH8 Gm12671-201ENSMUST00000119978 1002 ntBASIC12.39□□□□□ -0.43
Clrn3Q8BHH8 Gm13292-201ENSMUST00000120014 1000 ntBASIC12.39□□□□□ -0.43
Clrn3Q8BHH8 Gm12403-201ENSMUST00000121384 959 ntBASIC12.39□□□□□ -0.43
Clrn3Q8BHH8 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Clrn3Q8BHH8 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC12.39□□□□□ -0.43
Clrn3Q8BHH8 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC12.39□□□□□ -0.43
Clrn3Q8BHH8 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clrn3Q8BHH8 Gm10359-201ENSMUST00000180167 1002 ntBASIC12.39□□□□□ -0.43
Clrn3Q8BHH8 Gm12033-201ENSMUST00000180654 1002 ntBASIC12.39□□□□□ -0.43
Clrn3Q8BHH8 Gm5559-201ENSMUST00000180755 1002 ntBASIC12.39□□□□□ -0.43
Clrn3Q8BHH8 Gm4335-201ENSMUST00000182581 1004 ntBASIC12.39□□□□□ -0.43
Clrn3Q8BHH8 Mir6392-201ENSMUST00000184924 108 ntBASIC12.39□□□□□ -0.43
Clrn3Q8BHH8 Mir7654-201ENSMUST00000185082 70 ntBASIC12.39□□□□□ -0.43
Clrn3Q8BHH8 AL593843.1-201ENSMUST00000195891 145 ntBASIC12.39□□□□□ -0.43
Clrn3Q8BHH8 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Clrn3Q8BHH8 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.39□□□□□ -0.43
Clrn3Q8BHH8 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Clrn3Q8BHH8 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.39□□□□□ -0.43
Clrn3Q8BHH8 AC156560.2-201ENSMUST00000221232 264 ntBASIC12.39□□□□□ -0.43
Clrn3Q8BHH8 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clrn3Q8BHH8 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Clrn3Q8BHH8 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clrn3Q8BHH8 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clrn3Q8BHH8 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Clrn3Q8BHH8 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clrn3Q8BHH8 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC12.39□□□□□ -0.43
Clrn3Q8BHH8 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clrn3Q8BHH8 Gm44086-201ENSMUST00000203251 2349 ntBASIC12.39□□□□□ -0.43
Clrn3Q8BHH8 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clrn3Q8BHH8 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clrn3Q8BHH8 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clrn3Q8BHH8 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clrn3Q8BHH8 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.39□□□□□ -0.43
Clrn3Q8BHH8 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Clrn3Q8BHH8 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC12.39□□□□□ -0.43
Clrn3Q8BHH8 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Clrn3Q8BHH8 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Clrn3Q8BHH8 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Clrn3Q8BHH8 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Clrn3Q8BHH8 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clrn3Q8BHH8 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clrn3Q8BHH8 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clrn3Q8BHH8 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Clrn3Q8BHH8 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC12.38□□□□□ -0.43
Clrn3Q8BHH8 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Clrn3Q8BHH8 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Clrn3Q8BHH8 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Clrn3Q8BHH8 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Clrn3Q8BHH8 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Clrn3Q8BHH8 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Clrn3Q8BHH8 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Clrn3Q8BHH8 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Clrn3Q8BHH8 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
Clrn3Q8BHH8 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
Clrn3Q8BHH8 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC12.38□□□□□ -0.43
Clrn3Q8BHH8 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Clrn3Q8BHH8 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC12.38□□□□□ -0.43
Clrn3Q8BHH8 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Clrn3Q8BHH8 Gm45668-201ENSMUST00000211271 493 ntBASIC12.38□□□□□ -0.43
Clrn3Q8BHH8 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Clrn3Q8BHH8 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
Clrn3Q8BHH8 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
Clrn3Q8BHH8 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Clrn3Q8BHH8 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Clrn3Q8BHH8 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Clrn3Q8BHH8 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Clrn3Q8BHH8 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Clrn3Q8BHH8 Gm13730-201ENSMUST00000121036 1462 ntBASIC12.38□□□□□ -0.43
Clrn3Q8BHH8 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Clrn3Q8BHH8 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Clrn3Q8BHH8 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Clrn3Q8BHH8 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.38□□□□□ -0.43
Clrn3Q8BHH8 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Clrn3Q8BHH8 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Clrn3Q8BHH8 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Clrn3Q8BHH8 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Clrn3Q8BHH8 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Clrn3Q8BHH8 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Clrn3Q8BHH8 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Clrn3Q8BHH8 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Clrn3Q8BHH8 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Clrn3Q8BHH8 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Clrn3Q8BHH8 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Clrn3Q8BHH8 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms