Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.99□□□□□ -0.33
Ubp1Q811S7 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ubp1Q811S7 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ubp1Q811S7 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ubp1Q811S7 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ubp1Q811S7 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ubp1Q811S7 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Ubp1Q811S7 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC12.99□□□□□ -0.33
Ubp1Q811S7 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC12.99□□□□□ -0.33
Ubp1Q811S7 Gm5687-201ENSMUST00000118252 640 ntBASIC12.99□□□□□ -0.33
Ubp1Q811S7 Gm13612-201ENSMUST00000119276 390 ntBASIC12.99□□□□□ -0.33
Ubp1Q811S7 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Ubp1Q811S7 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Ubp1Q811S7 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ubp1Q811S7 Tbata-210ENSMUST00000151886 915 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ubp1Q811S7 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC12.99□□□□□ -0.33
Ubp1Q811S7 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ubp1Q811S7 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Ubp1Q811S7 Gm27839-201ENSMUST00000184242 106 ntBASIC12.99□□□□□ -0.33
Ubp1Q811S7 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC12.99□□□□□ -0.33
Ubp1Q811S7 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC12.99□□□□□ -0.33
Ubp1Q811S7 Gm11361-201ENSMUST00000223428 607 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Ubp1Q811S7 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ubp1Q811S7 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ubp1Q811S7 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ubp1Q811S7 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ubp1Q811S7 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ubp1Q811S7 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Ubp1Q811S7 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ubp1Q811S7 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ubp1Q811S7 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.99□□□□□ -0.33
Ubp1Q811S7 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ubp1Q811S7 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ubp1Q811S7 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ubp1Q811S7 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ubp1Q811S7 Gm6198-201ENSMUST00000191337 2929 ntBASIC12.99□□□□□ -0.33
Ubp1Q811S7 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ubp1Q811S7 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ubp1Q811S7 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ubp1Q811S7 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ubp1Q811S7 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ubp1Q811S7 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ubp1Q811S7 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ubp1Q811S7 Gm14371-201ENSMUST00000138925 1518 ntBASIC12.98□□□□□ -0.33
Ubp1Q811S7 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ubp1Q811S7 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Ubp1Q811S7 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ubp1Q811S7 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC12.98□□□□□ -0.33
Ubp1Q811S7 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ubp1Q811S7 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ubp1Q811S7 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ubp1Q811S7 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ubp1Q811S7 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ubp1Q811S7 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Ubp1Q811S7 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ubp1Q811S7 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ubp1Q811S7 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC12.98□□□□□ -0.33
Ubp1Q811S7 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
Ubp1Q811S7 Gm17794-201ENSMUST00000220252 955 ntBASIC12.98□□□□□ -0.33
Ubp1Q811S7 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ubp1Q811S7 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ubp1Q811S7 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ubp1Q811S7 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ubp1Q811S7 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ubp1Q811S7 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.98□□□□□ -0.33
Ubp1Q811S7 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Ubp1Q811S7 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.98□□□□□ -0.33
Ubp1Q811S7 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ubp1Q811S7 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ubp1Q811S7 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ubp1Q811S7 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Ubp1Q811S7 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ubp1Q811S7 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ubp1Q811S7 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ubp1Q811S7 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ubp1Q811S7 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ubp1Q811S7 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ubp1Q811S7 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ubp1Q811S7 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ubp1Q811S7 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.97□□□□□ -0.33
Ubp1Q811S7 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ubp1Q811S7 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ubp1Q811S7 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ubp1Q811S7 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
Ubp1Q811S7 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ubp1Q811S7 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ubp1Q811S7 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ubp1Q811S7 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ubp1Q811S7 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Ubp1Q811S7 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ubp1Q811S7 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ubp1Q811S7 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ubp1Q811S7 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ubp1Q811S7 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ubp1Q811S7 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ubp1Q811S7 Gm14350-201ENSMUST00000116642 640 ntBASIC12.97□□□□□ -0.33
Ubp1Q811S7 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC12.97□□□□□ -0.33
Ubp1Q811S7 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC12.97□□□□□ -0.33
Ubp1Q811S7 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ubp1Q811S7 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 134 ms