Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim36Q80WG7 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim36Q80WG7 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim36Q80WG7 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trim36Q80WG7 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
Trim36Q80WG7 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim36Q80WG7 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim36Q80WG7 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.73□□□□□ -0.37
Trim36Q80WG7 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trim36Q80WG7 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim36Q80WG7 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim36Q80WG7 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Trim36Q80WG7 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim36Q80WG7 AC139350.1-201ENSMUST00000227064 1594 ntBASIC12.73□□□□□ -0.37
Trim36Q80WG7 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim36Q80WG7 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim36Q80WG7 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Trim36Q80WG7 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim36Q80WG7 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trim36Q80WG7 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trim36Q80WG7 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trim36Q80WG7 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Trim36Q80WG7 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
Trim36Q80WG7 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim36Q80WG7 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim36Q80WG7 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trim36Q80WG7 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim36Q80WG7 Gm15163-201ENSMUST00000120749 1302 ntBASIC12.72□□□□□ -0.37
Trim36Q80WG7 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Trim36Q80WG7 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim36Q80WG7 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim36Q80WG7 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trim36Q80WG7 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC12.72□□□□□ -0.37
Trim36Q80WG7 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim36Q80WG7 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC12.72□□□□□ -0.37
Trim36Q80WG7 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC12.72□□□□□ -0.37
Trim36Q80WG7 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
Trim36Q80WG7 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC12.72□□□□□ -0.37
Trim36Q80WG7 Gm37917-201ENSMUST00000194711 392 ntBASIC12.72□□□□□ -0.37
Trim36Q80WG7 Gm8515-201ENSMUST00000194852 576 ntBASIC12.72□□□□□ -0.37
Trim36Q80WG7 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC12.72□□□□□ -0.37
Trim36Q80WG7 Gm18018-201ENSMUST00000198273 408 ntBASIC12.72□□□□□ -0.37
Trim36Q80WG7 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC12.72□□□□□ -0.37
Trim36Q80WG7 Gm9908-201ENSMUST00000211534 448 ntBASIC12.72□□□□□ -0.37
Trim36Q80WG7 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim36Q80WG7 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim36Q80WG7 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim36Q80WG7 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim36Q80WG7 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Trim36Q80WG7 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim36Q80WG7 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim36Q80WG7 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Trim36Q80WG7 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim36Q80WG7 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim36Q80WG7 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim36Q80WG7 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.72□□□□□ -0.37
Trim36Q80WG7 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC12.72□□□□□ -0.37
Trim36Q80WG7 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim36Q80WG7 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim36Q80WG7 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim36Q80WG7 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim36Q80WG7 Ntrk2-204ENSMUST00000224259 3049 ntBASIC12.72□□□□□ -0.37
Trim36Q80WG7 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trim36Q80WG7 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim36Q80WG7 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim36Q80WG7 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim36Q80WG7 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim36Q80WG7 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim36Q80WG7 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim36Q80WG7 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim36Q80WG7 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim36Q80WG7 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim36Q80WG7 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim36Q80WG7 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim36Q80WG7 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Trim36Q80WG7 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim36Q80WG7 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim36Q80WG7 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC12.71□□□□□ -0.37
Trim36Q80WG7 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trim36Q80WG7 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim36Q80WG7 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim36Q80WG7 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC12.71□□□□□ -0.37
Trim36Q80WG7 Gm12091-201ENSMUST00000146791 830 ntBASIC12.71□□□□□ -0.37
Trim36Q80WG7 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC12.71□□□□□ -0.37
Trim36Q80WG7 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC12.71□□□□□ -0.37
Trim36Q80WG7 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim36Q80WG7 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC12.71□□□□□ -0.37
Trim36Q80WG7 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim36Q80WG7 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim36Q80WG7 Gm15823-201ENSMUST00000064305 670 ntBASIC12.71□□□□□ -0.37
Trim36Q80WG7 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim36Q80WG7 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.71□□□□□ -0.37
Trim36Q80WG7 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim36Q80WG7 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Trim36Q80WG7 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim36Q80WG7 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trim36Q80WG7 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.38
Trim36Q80WG7 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trim36Q80WG7 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trim36Q80WG7 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms