Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Gm11918-201ENSMUST00000121660 179 ntBASIC9.87□□□□□ -0.83
Foxc1Q61572 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Foxc1Q61572 Prl3c1-203ENSMUST00000178072 579 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
Foxc1Q61572 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
Foxc1Q61572 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC9.87□□□□□ -0.83
Foxc1Q61572 Gm44738-201ENSMUST00000206393 371 ntTSL 2 BASIC9.87□□□□□ -0.83
Foxc1Q61572 Olfr206-202ENSMUST00000207927 1122 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Foxc1Q61572 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC9.87□□□□□ -0.83
Foxc1Q61572 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC9.87□□□□□ -0.83
Foxc1Q61572 Gm1715-201ENSMUST00000213681 1018 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Foxc1Q61572 Gm17795-201ENSMUST00000214505 757 ntBASIC9.87□□□□□ -0.83
Foxc1Q61572 AC139580.1-202ENSMUST00000223574 928 ntBASIC9.87□□□□□ -0.83
Foxc1Q61572 AC154687.2-201ENSMUST00000223853 640 ntBASIC9.87□□□□□ -0.83
Foxc1Q61572 AC117797.1-201ENSMUST00000223977 695 ntBASIC9.87□□□□□ -0.83
Foxc1Q61572 Cdk7-205ENSMUST00000225990 1159 ntBASIC9.87□□□□□ -0.83
Foxc1Q61572 Spata4-201ENSMUST00000033917 1057 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Foxc1Q61572 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Foxc1Q61572 9230110F15Rik-201ENSMUST00000054175 1135 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Foxc1Q61572 Tprkb-202ENSMUST00000089570 1216 ntTSL 5 BASIC9.87□□□□□ -0.83
Foxc1Q61572 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC9.87□□□□□ -0.83
Foxc1Q61572 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC9.87□□□□□ -0.83
Foxc1Q61572 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Foxc1Q61572 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
Foxc1Q61572 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Foxc1Q61572 Olfr282-204ENSMUST00000215320 1573 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Foxc1Q61572 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Foxc1Q61572 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Foxc1Q61572 Gm15222-202ENSMUST00000228667 1726 ntBASIC9.87□□□□□ -0.83
Foxc1Q61572 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC9.87□□□□□ -0.83
Foxc1Q61572 Hmgn3-203ENSMUST00000185315 1391 ntAPPRIS ALT2 TSL 2 BASIC9.87□□□□□ -0.83
Foxc1Q61572 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Foxc1Q61572 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC9.87□□□□□ -0.83
Foxc1Q61572 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC9.87□□□□□ -0.83
Foxc1Q61572 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC9.87□□□□□ -0.83
Foxc1Q61572 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Foxc1Q61572 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Foxc1Q61572 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC9.86□□□□□ -0.83
Foxc1Q61572 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Foxc1Q61572 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Foxc1Q61572 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Foxc1Q61572 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Foxc1Q61572 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Foxc1Q61572 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Foxc1Q61572 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Foxc1Q61572 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC9.86□□□□□ -0.83
Foxc1Q61572 AC159196.2-201ENSMUST00000224082 1622 ntBASIC9.86□□□□□ -0.83
Foxc1Q61572 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC9.86□□□□□ -0.83
Foxc1Q61572 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Foxc1Q61572 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC9.86□□□□□ -0.83
Foxc1Q61572 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Foxc1Q61572 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Foxc1Q61572 Tardbp-206ENSMUST00000105702 6425 ntTSL 5 BASIC9.86□□□□□ -0.83
Foxc1Q61572 Mir698-201ENSMUST00000102164 109 ntBASIC9.86□□□□□ -0.83
Foxc1Q61572 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Foxc1Q61572 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC9.86□□□□□ -0.83
Foxc1Q61572 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Foxc1Q61572 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Foxc1Q61572 Gm11557-201ENSMUST00000120200 1008 ntBASIC9.86□□□□□ -0.83
Foxc1Q61572 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Foxc1Q61572 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Foxc1Q61572 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC9.86□□□□□ -0.83
Foxc1Q61572 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC9.86□□□□□ -0.83
Foxc1Q61572 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC9.86□□□□□ -0.83
Foxc1Q61572 Gm8927-201ENSMUST00000181978 981 ntBASIC9.86□□□□□ -0.83
Foxc1Q61572 Gm2445-201ENSMUST00000182798 989 ntBASIC9.86□□□□□ -0.83
Foxc1Q61572 Gm27772-201ENSMUST00000184900 187 ntBASIC9.86□□□□□ -0.83
Foxc1Q61572 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC9.86□□□□□ -0.83
Foxc1Q61572 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC9.86□□□□□ -0.83
Foxc1Q61572 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Foxc1Q61572 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC9.86□□□□□ -0.83
Foxc1Q61572 Gm9908-201ENSMUST00000211534 448 ntBASIC9.86□□□□□ -0.83
Foxc1Q61572 4930442G15Rik-201ENSMUST00000213112 1000 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Foxc1Q61572 Gm36435-201ENSMUST00000213341 1178 ntTSL 5 BASIC9.86□□□□□ -0.83
Foxc1Q61572 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Foxc1Q61572 Gm19220-201ENSMUST00000222682 803 ntBASIC9.86□□□□□ -0.83
Foxc1Q61572 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Foxc1Q61572 Olfr1441-201ENSMUST00000059033 1088 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
Foxc1Q61572 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
Foxc1Q61572 Gm3222-201ENSMUST00000071282 990 ntBASIC9.86□□□□□ -0.83
Foxc1Q61572 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Foxc1Q61572 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Foxc1Q61572 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Foxc1Q61572 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Foxc1Q61572 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Foxc1Q61572 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Foxc1Q61572 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Foxc1Q61572 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC9.86□□□□□ -0.83
Foxc1Q61572 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Foxc1Q61572 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Foxc1Q61572 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
Foxc1Q61572 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Foxc1Q61572 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Foxc1Q61572 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Foxc1Q61572 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Foxc1Q61572 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC9.86□□□□□ -0.83
Foxc1Q61572 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Foxc1Q61572 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
Foxc1Q61572 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Foxc1Q61572 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Foxc1Q61572 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms