Protein–RNA interactions for Protein: Q4FZF3

Ddx49, Probable ATP-dependent RNA helicase DDX49, mousemouse

Known RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49Q4FZF3 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ddx49Q4FZF3 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ddx49Q4FZF3 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ddx49Q4FZF3 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ddx49Q4FZF3 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ddx49Q4FZF3 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ddx49Q4FZF3 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ddx49Q4FZF3 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Ddx49Q4FZF3 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ddx49Q4FZF3 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ddx49Q4FZF3 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ddx49Q4FZF3 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Ddx49Q4FZF3 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Ddx49Q4FZF3 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Ddx49Q4FZF3 Gm14726-201ENSMUST00000120623 896 ntBASIC15.3■□□□□ 0.04
Ddx49Q4FZF3 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ddx49Q4FZF3 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ddx49Q4FZF3 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC15.3■□□□□ 0.04
Ddx49Q4FZF3 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC15.3■□□□□ 0.04
Ddx49Q4FZF3 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ddx49Q4FZF3 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC15.3■□□□□ 0.04
Ddx49Q4FZF3 Gm2260-201ENSMUST00000184965 657 ntBASIC15.3■□□□□ 0.04
Ddx49Q4FZF3 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ddx49Q4FZF3 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ddx49Q4FZF3 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ddx49Q4FZF3 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC15.3■□□□□ 0.04
Ddx49Q4FZF3 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC15.3■□□□□ 0.04
Ddx49Q4FZF3 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC15.3■□□□□ 0.04
Ddx49Q4FZF3 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC15.3■□□□□ 0.04
Ddx49Q4FZF3 AC122305.4-201ENSMUST00000216159 1206 ntBASIC15.3■□□□□ 0.04
Ddx49Q4FZF3 AC096628.2-201ENSMUST00000225443 1413 ntBASIC15.3■□□□□ 0.04
Ddx49Q4FZF3 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC15.3■□□□□ 0.04
Ddx49Q4FZF3 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ddx49Q4FZF3 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ddx49Q4FZF3 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ddx49Q4FZF3 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ddx49Q4FZF3 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ddx49Q4FZF3 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ddx49Q4FZF3 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC15.29■□□□□ 0.04
Ddx49Q4FZF3 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ddx49Q4FZF3 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ddx49Q4FZF3 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ddx49Q4FZF3 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Ddx49Q4FZF3 Gm37844-201ENSMUST00000192473 4097 ntBASIC15.29■□□□□ 0.04
Ddx49Q4FZF3 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ddx49Q4FZF3 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ddx49Q4FZF3 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC15.29■□□□□ 0.04
Ddx49Q4FZF3 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Ddx49Q4FZF3 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ddx49Q4FZF3 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ddx49Q4FZF3 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC15.29■□□□□ 0.04
Ddx49Q4FZF3 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Ddx49Q4FZF3 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ddx49Q4FZF3 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC15.29■□□□□ 0.04
Ddx49Q4FZF3 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ddx49Q4FZF3 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ddx49Q4FZF3 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ddx49Q4FZF3 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ddx49Q4FZF3 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Ddx49Q4FZF3 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Ddx49Q4FZF3 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC15.29■□□□□ 0.04
Ddx49Q4FZF3 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC15.29■□□□□ 0.04
Ddx49Q4FZF3 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC15.29■□□□□ 0.04
Ddx49Q4FZF3 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ddx49Q4FZF3 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC15.29■□□□□ 0.04
Ddx49Q4FZF3 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC15.29■□□□□ 0.04
Ddx49Q4FZF3 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ddx49Q4FZF3 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ddx49Q4FZF3 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ddx49Q4FZF3 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ddx49Q4FZF3 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ddx49Q4FZF3 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC15.29■□□□□ 0.04
Ddx49Q4FZF3 Gm28182-201ENSMUST00000188354 2477 ntBASIC15.29■□□□□ 0.04
Ddx49Q4FZF3 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ddx49Q4FZF3 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ddx49Q4FZF3 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ddx49Q4FZF3 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ddx49Q4FZF3 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ddx49Q4FZF3 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ddx49Q4FZF3 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ddx49Q4FZF3 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Ddx49Q4FZF3 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Ddx49Q4FZF3 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Ddx49Q4FZF3 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ddx49Q4FZF3 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ddx49Q4FZF3 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ddx49Q4FZF3 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ddx49Q4FZF3 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ddx49Q4FZF3 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ddx49Q4FZF3 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ddx49Q4FZF3 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ddx49Q4FZF3 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ddx49Q4FZF3 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Ddx49Q4FZF3 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ddx49Q4FZF3 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Ddx49Q4FZF3 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ddx49Q4FZF3 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ddx49Q4FZF3 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ddx49Q4FZF3 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ddx49Q4FZF3 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms