Protein–RNA interactions for Protein: Q3V0M8

BC051142, Testis specific basic protein, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BC051142Q3V0M8 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
BC051142Q3V0M8 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
BC051142Q3V0M8 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
BC051142Q3V0M8 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
BC051142Q3V0M8 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
BC051142Q3V0M8 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
BC051142Q3V0M8 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
BC051142Q3V0M8 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
BC051142Q3V0M8 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
BC051142Q3V0M8 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
BC051142Q3V0M8 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
BC051142Q3V0M8 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
BC051142Q3V0M8 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
BC051142Q3V0M8 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
BC051142Q3V0M8 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
BC051142Q3V0M8 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
BC051142Q3V0M8 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC14.05□□□□□ -0.16
BC051142Q3V0M8 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
BC051142Q3V0M8 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
BC051142Q3V0M8 Gm26616-202ENSMUST00000195676 3107 ntBASIC14.05□□□□□ -0.16
BC051142Q3V0M8 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
BC051142Q3V0M8 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
BC051142Q3V0M8 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
BC051142Q3V0M8 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
BC051142Q3V0M8 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
BC051142Q3V0M8 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
BC051142Q3V0M8 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
BC051142Q3V0M8 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC14.05□□□□□ -0.16
BC051142Q3V0M8 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
BC051142Q3V0M8 Gm15429-201ENSMUST00000151268 798 ntBASIC14.05□□□□□ -0.16
BC051142Q3V0M8 Gm6983-201ENSMUST00000214912 628 ntBASIC14.05□□□□□ -0.16
BC051142Q3V0M8 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
BC051142Q3V0M8 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC14.05□□□□□ -0.16
BC051142Q3V0M8 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
BC051142Q3V0M8 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
BC051142Q3V0M8 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
BC051142Q3V0M8 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
BC051142Q3V0M8 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
BC051142Q3V0M8 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
BC051142Q3V0M8 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
BC051142Q3V0M8 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
BC051142Q3V0M8 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
BC051142Q3V0M8 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
BC051142Q3V0M8 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
BC051142Q3V0M8 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
BC051142Q3V0M8 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
BC051142Q3V0M8 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
BC051142Q3V0M8 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
BC051142Q3V0M8 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
BC051142Q3V0M8 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
BC051142Q3V0M8 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
BC051142Q3V0M8 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
BC051142Q3V0M8 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
BC051142Q3V0M8 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC14.04□□□□□ -0.16
BC051142Q3V0M8 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
BC051142Q3V0M8 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
BC051142Q3V0M8 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
BC051142Q3V0M8 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
BC051142Q3V0M8 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
BC051142Q3V0M8 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC14.04□□□□□ -0.16
BC051142Q3V0M8 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC14.04□□□□□ -0.16
BC051142Q3V0M8 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
BC051142Q3V0M8 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC14.04□□□□□ -0.16
BC051142Q3V0M8 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
BC051142Q3V0M8 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC14.04□□□□□ -0.16
BC051142Q3V0M8 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC14.04□□□□□ -0.16
BC051142Q3V0M8 AC159006.1-201ENSMUST00000226396 258 ntBASIC14.04□□□□□ -0.16
BC051142Q3V0M8 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
BC051142Q3V0M8 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
BC051142Q3V0M8 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
BC051142Q3V0M8 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
BC051142Q3V0M8 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
BC051142Q3V0M8 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
BC051142Q3V0M8 Gm18630-201ENSMUST00000222109 1397 ntBASIC14.04□□□□□ -0.16
BC051142Q3V0M8 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
BC051142Q3V0M8 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
BC051142Q3V0M8 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
BC051142Q3V0M8 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
BC051142Q3V0M8 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
BC051142Q3V0M8 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
BC051142Q3V0M8 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
BC051142Q3V0M8 AC151895.1-201ENSMUST00000219025 1742 ntBASIC14.04□□□□□ -0.16
BC051142Q3V0M8 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
BC051142Q3V0M8 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
BC051142Q3V0M8 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC14.03□□□□□ -0.16
BC051142Q3V0M8 Abhd6-203ENSMUST00000225234 1958 ntBASIC14.03□□□□□ -0.16
BC051142Q3V0M8 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
BC051142Q3V0M8 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
BC051142Q3V0M8 Gm44851-201ENSMUST00000205735 2309 ntBASIC14.03□□□□□ -0.16
BC051142Q3V0M8 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
BC051142Q3V0M8 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
BC051142Q3V0M8 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
BC051142Q3V0M8 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
BC051142Q3V0M8 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC14.03□□□□□ -0.16
BC051142Q3V0M8 Gm5276-201ENSMUST00000196683 1047 ntBASIC14.03□□□□□ -0.16
BC051142Q3V0M8 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
BC051142Q3V0M8 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC14.03□□□□□ -0.16
BC051142Q3V0M8 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC14.03□□□□□ -0.16
BC051142Q3V0M8 Gm45668-201ENSMUST00000211271 493 ntBASIC14.03□□□□□ -0.16
BC051142Q3V0M8 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms