Protein–RNA interactions for Protein: Q3UP24

Nlrc4, NLR family CARD domain-containing protein 4, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nlrc4Q3UP24 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nlrc4Q3UP24 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nlrc4Q3UP24 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nlrc4Q3UP24 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC13.86□□□□□ -0.19
Nlrc4Q3UP24 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Nlrc4Q3UP24 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nlrc4Q3UP24 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Nlrc4Q3UP24 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nlrc4Q3UP24 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Nlrc4Q3UP24 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nlrc4Q3UP24 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Nlrc4Q3UP24 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nlrc4Q3UP24 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Nlrc4Q3UP24 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.85□□□□□ -0.19
Nlrc4Q3UP24 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Nlrc4Q3UP24 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nlrc4Q3UP24 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nlrc4Q3UP24 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nlrc4Q3UP24 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC13.85□□□□□ -0.19
Nlrc4Q3UP24 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Nlrc4Q3UP24 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nlrc4Q3UP24 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nlrc4Q3UP24 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nlrc4Q3UP24 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Nlrc4Q3UP24 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC13.85□□□□□ -0.19
Nlrc4Q3UP24 AC135669.1-202ENSMUST00000216742 540 ntBASIC13.85□□□□□ -0.19
Nlrc4Q3UP24 Gm2824-203ENSMUST00000226189 1228 ntBASIC13.85□□□□□ -0.19
Nlrc4Q3UP24 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nlrc4Q3UP24 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Nlrc4Q3UP24 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC13.85□□□□□ -0.19
Nlrc4Q3UP24 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nlrc4Q3UP24 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Nlrc4Q3UP24 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Nlrc4Q3UP24 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Nlrc4Q3UP24 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nlrc4Q3UP24 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC13.85□□□□□ -0.19
Nlrc4Q3UP24 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nlrc4Q3UP24 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nlrc4Q3UP24 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nlrc4Q3UP24 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nlrc4Q3UP24 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nlrc4Q3UP24 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nlrc4Q3UP24 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nlrc4Q3UP24 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Nlrc4Q3UP24 Gm15222-202ENSMUST00000228667 1726 ntBASIC13.84□□□□□ -0.19
Nlrc4Q3UP24 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Nlrc4Q3UP24 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Nlrc4Q3UP24 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC13.84□□□□□ -0.19
Nlrc4Q3UP24 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC13.84□□□□□ -0.19
Nlrc4Q3UP24 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nlrc4Q3UP24 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nlrc4Q3UP24 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Nlrc4Q3UP24 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Nlrc4Q3UP24 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Nlrc4Q3UP24 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nlrc4Q3UP24 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC13.84□□□□□ -0.19
Nlrc4Q3UP24 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nlrc4Q3UP24 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nlrc4Q3UP24 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC13.84□□□□□ -0.19
Nlrc4Q3UP24 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Nlrc4Q3UP24 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nlrc4Q3UP24 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Nlrc4Q3UP24 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Nlrc4Q3UP24 Gm15824-201ENSMUST00000119516 955 ntBASIC13.84□□□□□ -0.19
Nlrc4Q3UP24 Gm11425-201ENSMUST00000119608 498 ntBASIC13.84□□□□□ -0.19
Nlrc4Q3UP24 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nlrc4Q3UP24 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Nlrc4Q3UP24 Gm19931-201ENSMUST00000198920 368 ntBASIC13.84□□□□□ -0.19
Nlrc4Q3UP24 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC13.84□□□□□ -0.19
Nlrc4Q3UP24 AC134254.1-201ENSMUST00000221362 167 ntBASIC13.84□□□□□ -0.19
Nlrc4Q3UP24 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nlrc4Q3UP24 Gm10146-201ENSMUST00000072739 309 ntBASIC13.84□□□□□ -0.19
Nlrc4Q3UP24 Gm9396-201ENSMUST00000076703 567 ntBASIC13.84□□□□□ -0.19
Nlrc4Q3UP24 Gm25857-201ENSMUST00000082788 129 ntBASIC13.84□□□□□ -0.19
Nlrc4Q3UP24 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nlrc4Q3UP24 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nlrc4Q3UP24 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Nlrc4Q3UP24 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC13.84□□□□□ -0.19
Nlrc4Q3UP24 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nlrc4Q3UP24 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nlrc4Q3UP24 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Nlrc4Q3UP24 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nlrc4Q3UP24 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nlrc4Q3UP24 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Nlrc4Q3UP24 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Nlrc4Q3UP24 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nlrc4Q3UP24 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Nlrc4Q3UP24 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Nlrc4Q3UP24 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
Nlrc4Q3UP24 Gm44401-201ENSMUST00000204462 2375 ntBASIC13.83□□□□□ -0.19
Nlrc4Q3UP24 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Nlrc4Q3UP24 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nlrc4Q3UP24 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nlrc4Q3UP24 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Nlrc4Q3UP24 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.83□□□□□ -0.2
Nlrc4Q3UP24 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nlrc4Q3UP24 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC13.83□□□□□ -0.2
Nlrc4Q3UP24 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nlrc4Q3UP24 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Nlrc4Q3UP24 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC13.83□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms