Protein–RNA interactions for Protein: Q3U2C5

Rnf149, E3 ubiquitin-protein ligase RNF149, mousemouse

Predictions only

Length 394 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf149Q3U2C5 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC11.82□□□□□ -0.52
Rnf149Q3U2C5 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC11.82□□□□□ -0.52
Rnf149Q3U2C5 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf149Q3U2C5 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC11.82□□□□□ -0.52
Rnf149Q3U2C5 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf149Q3U2C5 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf149Q3U2C5 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf149Q3U2C5 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf149Q3U2C5 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf149Q3U2C5 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf149Q3U2C5 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf149Q3U2C5 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Rnf149Q3U2C5 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf149Q3U2C5 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf149Q3U2C5 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Rnf149Q3U2C5 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf149Q3U2C5 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC11.82□□□□□ -0.52
Rnf149Q3U2C5 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf149Q3U2C5 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC11.82□□□□□ -0.52
Rnf149Q3U2C5 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Rnf149Q3U2C5 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf149Q3U2C5 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Rnf149Q3U2C5 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf149Q3U2C5 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf149Q3U2C5 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf149Q3U2C5 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Rnf149Q3U2C5 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf149Q3U2C5 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf149Q3U2C5 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf149Q3U2C5 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf149Q3U2C5 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf149Q3U2C5 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf149Q3U2C5 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf149Q3U2C5 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf149Q3U2C5 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf149Q3U2C5 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf149Q3U2C5 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Rnf149Q3U2C5 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC11.81□□□□□ -0.52
Rnf149Q3U2C5 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC11.81□□□□□ -0.52
Rnf149Q3U2C5 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf149Q3U2C5 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
Rnf149Q3U2C5 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf149Q3U2C5 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf149Q3U2C5 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC11.81□□□□□ -0.52
Rnf149Q3U2C5 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC11.81□□□□□ -0.52
Rnf149Q3U2C5 Gm15460-201ENSMUST00000118147 391 ntBASIC11.81□□□□□ -0.52
Rnf149Q3U2C5 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf149Q3U2C5 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC11.81□□□□□ -0.52
Rnf149Q3U2C5 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
Rnf149Q3U2C5 Mir6977-201ENSMUST00000184960 64 ntBASIC11.81□□□□□ -0.52
Rnf149Q3U2C5 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf149Q3U2C5 AC166997.1-201ENSMUST00000225122 572 ntBASIC11.81□□□□□ -0.52
Rnf149Q3U2C5 AC238811.1-201ENSMUST00000225302 441 ntBASIC11.81□□□□□ -0.52
Rnf149Q3U2C5 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf149Q3U2C5 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf149Q3U2C5 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf149Q3U2C5 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf149Q3U2C5 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC11.81□□□□□ -0.52
Rnf149Q3U2C5 Gm43273-201ENSMUST00000199649 2594 ntBASIC11.81□□□□□ -0.52
Rnf149Q3U2C5 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf149Q3U2C5 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf149Q3U2C5 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf149Q3U2C5 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf149Q3U2C5 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Rnf149Q3U2C5 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Rnf149Q3U2C5 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf149Q3U2C5 Gm28323-201ENSMUST00000186817 2499 ntBASIC11.81□□□□□ -0.52
Rnf149Q3U2C5 Gm42863-201ENSMUST00000197875 2958 ntBASIC11.81□□□□□ -0.52
Rnf149Q3U2C5 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf149Q3U2C5 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC11.81□□□□□ -0.52
Rnf149Q3U2C5 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC11.81□□□□□ -0.52
Rnf149Q3U2C5 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf149Q3U2C5 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf149Q3U2C5 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Rnf149Q3U2C5 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf149Q3U2C5 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf149Q3U2C5 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf149Q3U2C5 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf149Q3U2C5 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf149Q3U2C5 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf149Q3U2C5 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf149Q3U2C5 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf149Q3U2C5 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf149Q3U2C5 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf149Q3U2C5 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf149Q3U2C5 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf149Q3U2C5 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf149Q3U2C5 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC11.8□□□□□ -0.52
Rnf149Q3U2C5 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf149Q3U2C5 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf149Q3U2C5 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf149Q3U2C5 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf149Q3U2C5 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf149Q3U2C5 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf149Q3U2C5 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf149Q3U2C5 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf149Q3U2C5 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC11.8□□□□□ -0.52
Rnf149Q3U2C5 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf149Q3U2C5 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Rnf149Q3U2C5 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms