Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chd8Q09XV5 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chd8Q09XV5 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
Chd8Q09XV5 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chd8Q09XV5 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC11.66□□□□□ -0.54
Chd8Q09XV5 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chd8Q09XV5 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chd8Q09XV5 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chd8Q09XV5 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC11.66□□□□□ -0.54
Chd8Q09XV5 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Chd8Q09XV5 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chd8Q09XV5 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Chd8Q09XV5 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
Chd8Q09XV5 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Chd8Q09XV5 Gm10731-201ENSMUST00000181171 448 ntBASIC11.66□□□□□ -0.54
Chd8Q09XV5 Gm7719-201ENSMUST00000182374 975 ntBASIC11.66□□□□□ -0.54
Chd8Q09XV5 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Chd8Q09XV5 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC11.66□□□□□ -0.54
Chd8Q09XV5 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chd8Q09XV5 Gm45060-201ENSMUST00000203293 593 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Chd8Q09XV5 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chd8Q09XV5 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chd8Q09XV5 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chd8Q09XV5 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chd8Q09XV5 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chd8Q09XV5 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chd8Q09XV5 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chd8Q09XV5 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chd8Q09XV5 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC11.66□□□□□ -0.54
Chd8Q09XV5 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC11.66□□□□□ -0.54
Chd8Q09XV5 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Chd8Q09XV5 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chd8Q09XV5 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chd8Q09XV5 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chd8Q09XV5 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Chd8Q09XV5 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chd8Q09XV5 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chd8Q09XV5 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chd8Q09XV5 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chd8Q09XV5 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chd8Q09XV5 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chd8Q09XV5 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chd8Q09XV5 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chd8Q09XV5 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Chd8Q09XV5 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chd8Q09XV5 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chd8Q09XV5 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Chd8Q09XV5 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC11.66□□□□□ -0.54
Chd8Q09XV5 Gm29304-201ENSMUST00000186555 695 ntBASIC11.66□□□□□ -0.54
Chd8Q09XV5 Gm29223-201ENSMUST00000188867 695 ntBASIC11.66□□□□□ -0.54
Chd8Q09XV5 Gm37921-201ENSMUST00000194333 695 ntBASIC11.66□□□□□ -0.54
Chd8Q09XV5 Gm5870-201ENSMUST00000196461 282 ntBASIC11.66□□□□□ -0.54
Chd8Q09XV5 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Chd8Q09XV5 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC11.66□□□□□ -0.54
Chd8Q09XV5 Gm18123-201ENSMUST00000210874 822 ntBASIC11.66□□□□□ -0.54
Chd8Q09XV5 AC154257.1-202ENSMUST00000224729 843 ntBASIC11.66□□□□□ -0.54
Chd8Q09XV5 Prok2-201ENSMUST00000008273 594 ntTSL 3 BASIC11.66□□□□□ -0.54
Chd8Q09XV5 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Chd8Q09XV5 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Chd8Q09XV5 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Chd8Q09XV5 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Chd8Q09XV5 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Chd8Q09XV5 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Chd8Q09XV5 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Chd8Q09XV5 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Chd8Q09XV5 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Chd8Q09XV5 Gm7789-202ENSMUST00000211273 1400 ntBASIC11.65□□□□□ -0.54
Chd8Q09XV5 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Chd8Q09XV5 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Chd8Q09XV5 Ighv5-15-201ENSMUST00000103457 350 ntAPPRIS ALT2 BASIC11.65□□□□□ -0.54
Chd8Q09XV5 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC11.65□□□□□ -0.54
Chd8Q09XV5 Gm25226-201ENSMUST00000158198 123 ntBASIC11.65□□□□□ -0.54
Chd8Q09XV5 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC11.65□□□□□ -0.54
Chd8Q09XV5 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Chd8Q09XV5 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Chd8Q09XV5 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Chd8Q09XV5 Gm9129-201ENSMUST00000218173 1689 ntBASIC11.65□□□□□ -0.54
Chd8Q09XV5 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Chd8Q09XV5 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Chd8Q09XV5 Trim34b-202ENSMUST00000180136 1535 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Chd8Q09XV5 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC11.65□□□□□ -0.54
Chd8Q09XV5 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Chd8Q09XV5 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Chd8Q09XV5 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Chd8Q09XV5 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Chd8Q09XV5 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Chd8Q09XV5 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Chd8Q09XV5 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Chd8Q09XV5 Gm44158-201ENSMUST00000203881 505 ntBASIC11.65□□□□□ -0.55
Chd8Q09XV5 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Chd8Q09XV5 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.55
Chd8Q09XV5 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Chd8Q09XV5 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.55
Chd8Q09XV5 CT009713.10-201ENSMUST00000225013 1986 ntBASIC11.64□□□□□ -0.55
Chd8Q09XV5 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Chd8Q09XV5 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Chd8Q09XV5 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Chd8Q09XV5 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Chd8Q09XV5 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Chd8Q09XV5 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC11.64□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms