Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lig3P97386 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lig3P97386 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Lig3P97386 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Lig3P97386 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lig3P97386 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lig3P97386 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lig3P97386 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lig3P97386 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Lig3P97386 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Lig3P97386 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Lig3P97386 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lig3P97386 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lig3P97386 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Lig3P97386 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Lig3P97386 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lig3P97386 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Lig3P97386 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
Lig3P97386 Gm13612-201ENSMUST00000119276 390 ntBASIC14.39□□□□□ -0.11
Lig3P97386 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC14.39□□□□□ -0.11
Lig3P97386 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Lig3P97386 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Lig3P97386 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC14.39□□□□□ -0.11
Lig3P97386 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Lig3P97386 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC14.39□□□□□ -0.11
Lig3P97386 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lig3P97386 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lig3P97386 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lig3P97386 Gm24526-201ENSMUST00000082921 158 ntBASIC14.39□□□□□ -0.11
Lig3P97386 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC14.39□□□□□ -0.11
Lig3P97386 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Lig3P97386 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Lig3P97386 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Lig3P97386 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Lig3P97386 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Lig3P97386 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lig3P97386 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Lig3P97386 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lig3P97386 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Lig3P97386 Gm27194-201ENSMUST00000175753 2936 ntBASIC14.38□□□□□ -0.11
Lig3P97386 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lig3P97386 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lig3P97386 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lig3P97386 Gm38037-201ENSMUST00000192600 1624 ntBASIC14.38□□□□□ -0.11
Lig3P97386 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC14.38□□□□□ -0.11
Lig3P97386 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lig3P97386 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lig3P97386 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC14.38□□□□□ -0.11
Lig3P97386 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC14.38□□□□□ -0.11
Lig3P97386 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lig3P97386 Gm9823-201ENSMUST00000051212 327 ntBASIC14.38□□□□□ -0.11
Lig3P97386 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lig3P97386 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC14.38□□□□□ -0.11
Lig3P97386 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lig3P97386 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lig3P97386 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Lig3P97386 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lig3P97386 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lig3P97386 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lig3P97386 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lig3P97386 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Lig3P97386 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lig3P97386 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lig3P97386 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lig3P97386 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lig3P97386 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lig3P97386 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lig3P97386 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Lig3P97386 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Lig3P97386 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lig3P97386 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Lig3P97386 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lig3P97386 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Lig3P97386 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Lig3P97386 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Lig3P97386 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC14.37□□□□□ -0.11
Lig3P97386 Gm15957-201ENSMUST00000118893 974 ntBASIC14.37□□□□□ -0.11
Lig3P97386 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC14.37□□□□□ -0.11
Lig3P97386 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Lig3P97386 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC14.37□□□□□ -0.11
Lig3P97386 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC14.37□□□□□ -0.11
Lig3P97386 Gm29199-201ENSMUST00000187766 775 ntBASIC14.37□□□□□ -0.11
Lig3P97386 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC14.37□□□□□ -0.11
Lig3P97386 Gm19184-201ENSMUST00000196798 928 ntBASIC14.37□□□□□ -0.11
Lig3P97386 Gm7783-201ENSMUST00000204795 781 ntBASIC14.37□□□□□ -0.11
Lig3P97386 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Lig3P97386 Gm15889-202ENSMUST00000212669 2443 ntBASIC14.37□□□□□ -0.11
Lig3P97386 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Lig3P97386 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lig3P97386 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lig3P97386 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lig3P97386 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lig3P97386 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lig3P97386 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
Lig3P97386 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lig3P97386 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Lig3P97386 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lig3P97386 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Lig3P97386 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lig3P97386 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms