Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
H3f3aP84244 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
H3f3aP84244 Gm11803-201ENSMUST00000119966 444 ntBASIC11.72□□□□□ -0.53
H3f3aP84244 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
H3f3aP84244 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC11.72□□□□□ -0.53
H3f3aP84244 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
H3f3aP84244 Gm5745-201ENSMUST00000183748 313 ntBASIC11.72□□□□□ -0.53
H3f3aP84244 Gm27486-201ENSMUST00000184923 80 ntBASIC11.72□□□□□ -0.53
H3f3aP84244 Gm18041-201ENSMUST00000218210 618 ntBASIC11.72□□□□□ -0.53
H3f3aP84244 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
H3f3aP84244 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
H3f3aP84244 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
H3f3aP84244 Grk6-205ENSMUST00000224653 2976 ntBASIC11.72□□□□□ -0.53
H3f3aP84244 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
H3f3aP84244 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
H3f3aP84244 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
H3f3aP84244 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
H3f3aP84244 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
H3f3aP84244 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
H3f3aP84244 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
H3f3aP84244 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
H3f3aP84244 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC11.71□□□□□ -0.53
H3f3aP84244 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
H3f3aP84244 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
H3f3aP84244 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
H3f3aP84244 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
H3f3aP84244 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
H3f3aP84244 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
H3f3aP84244 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
H3f3aP84244 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
H3f3aP84244 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
H3f3aP84244 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
H3f3aP84244 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
H3f3aP84244 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
H3f3aP84244 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
H3f3aP84244 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
H3f3aP84244 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
H3f3aP84244 Gm16202-201ENSMUST00000117532 544 ntBASIC11.71□□□□□ -0.53
H3f3aP84244 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
H3f3aP84244 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC11.71□□□□□ -0.53
H3f3aP84244 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
H3f3aP84244 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC11.71□□□□□ -0.53
H3f3aP84244 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
H3f3aP84244 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC11.71□□□□□ -0.53
H3f3aP84244 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
H3f3aP84244 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
H3f3aP84244 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
H3f3aP84244 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
H3f3aP84244 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
H3f3aP84244 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
H3f3aP84244 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.54
H3f3aP84244 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC11.71□□□□□ -0.54
H3f3aP84244 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.54
H3f3aP84244 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
H3f3aP84244 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
H3f3aP84244 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
H3f3aP84244 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
H3f3aP84244 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC11.71□□□□□ -0.54
H3f3aP84244 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.54
H3f3aP84244 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
H3f3aP84244 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
H3f3aP84244 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
H3f3aP84244 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
H3f3aP84244 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC11.7□□□□□ -0.54
H3f3aP84244 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
H3f3aP84244 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
H3f3aP84244 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC11.7□□□□□ -0.54
H3f3aP84244 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
H3f3aP84244 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
H3f3aP84244 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
H3f3aP84244 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
H3f3aP84244 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
H3f3aP84244 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC11.7□□□□□ -0.54
H3f3aP84244 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
H3f3aP84244 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
H3f3aP84244 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
H3f3aP84244 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
H3f3aP84244 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC11.7□□□□□ -0.54
H3f3aP84244 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC11.7□□□□□ -0.54
H3f3aP84244 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
H3f3aP84244 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
H3f3aP84244 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
H3f3aP84244 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
H3f3aP84244 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
H3f3aP84244 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC11.7□□□□□ -0.54
H3f3aP84244 Gm19931-201ENSMUST00000198920 368 ntBASIC11.7□□□□□ -0.54
H3f3aP84244 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC11.7□□□□□ -0.54
H3f3aP84244 Gm7561-201ENSMUST00000211203 886 ntBASIC11.7□□□□□ -0.54
H3f3aP84244 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC11.7□□□□□ -0.54
H3f3aP84244 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
H3f3aP84244 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
H3f3aP84244 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
H3f3aP84244 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC11.7□□□□□ -0.54
H3f3aP84244 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
H3f3aP84244 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
H3f3aP84244 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
H3f3aP84244 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC11.7□□□□□ -0.54
H3f3aP84244 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
H3f3aP84244 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC11.7□□□□□ -0.54
H3f3aP84244 AC122314.1-201ENSMUST00000223056 2239 ntBASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms