Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ybx1P62960 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ybx1P62960 AC154262.2-201ENSMUST00000224310 2293 ntBASIC13.45□□□□□ -0.26
Ybx1P62960 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ybx1P62960 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC13.45□□□□□ -0.26
Ybx1P62960 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ybx1P62960 Gm12997-201ENSMUST00000120207 640 ntBASIC13.45□□□□□ -0.26
Ybx1P62960 Gm11978-201ENSMUST00000122315 466 ntBASIC13.45□□□□□ -0.26
Ybx1P62960 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ybx1P62960 Gm24548-201ENSMUST00000158650 108 ntBASIC13.45□□□□□ -0.26
Ybx1P62960 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ybx1P62960 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Ybx1P62960 Gm2383-201ENSMUST00000181461 807 ntBASIC13.45□□□□□ -0.26
Ybx1P62960 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
Ybx1P62960 Gm32025-201ENSMUST00000217960 307 ntBASIC13.45□□□□□ -0.26
Ybx1P62960 Gm5781-201ENSMUST00000219792 443 ntBASIC13.45□□□□□ -0.26
Ybx1P62960 CT025533.2-201ENSMUST00000228715 1248 ntBASIC13.45□□□□□ -0.26
Ybx1P62960 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ybx1P62960 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Ybx1P62960 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC13.45□□□□□ -0.26
Ybx1P62960 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ybx1P62960 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC13.45□□□□□ -0.26
Ybx1P62960 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Ybx1P62960 Gm44065-201ENSMUST00000203184 3527 ntBASIC13.45□□□□□ -0.26
Ybx1P62960 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ybx1P62960 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ybx1P62960 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ybx1P62960 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Ybx1P62960 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ybx1P62960 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ybx1P62960 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ybx1P62960 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ybx1P62960 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ybx1P62960 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
Ybx1P62960 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ybx1P62960 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Ybx1P62960 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ybx1P62960 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC13.44□□□□□ -0.26
Ybx1P62960 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC13.44□□□□□ -0.26
Ybx1P62960 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ybx1P62960 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ybx1P62960 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ybx1P62960 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ybx1P62960 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ybx1P62960 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ybx1P62960 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ybx1P62960 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ybx1P62960 AC121805.2-201ENSMUST00000218808 2538 ntBASIC13.44□□□□□ -0.26
Ybx1P62960 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ybx1P62960 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC13.44□□□□□ -0.26
Ybx1P62960 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ybx1P62960 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ybx1P62960 Mir7070-201ENSMUST00000183657 86 ntBASIC13.44□□□□□ -0.26
Ybx1P62960 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ybx1P62960 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC13.44□□□□□ -0.26
Ybx1P62960 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC13.44□□□□□ -0.26
Ybx1P62960 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ybx1P62960 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Ybx1P62960 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC13.44□□□□□ -0.26
Ybx1P62960 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ybx1P62960 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ybx1P62960 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ybx1P62960 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ybx1P62960 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ybx1P62960 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ybx1P62960 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ybx1P62960 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ybx1P62960 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Ybx1P62960 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ybx1P62960 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ybx1P62960 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ybx1P62960 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ybx1P62960 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ybx1P62960 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ybx1P62960 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC13.43□□□□□ -0.26
Ybx1P62960 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ybx1P62960 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ybx1P62960 Gm15897-201ENSMUST00000117770 1486 ntBASIC13.43□□□□□ -0.26
Ybx1P62960 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ybx1P62960 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ybx1P62960 Gm17208-201ENSMUST00000168388 535 ntBASIC13.43□□□□□ -0.26
Ybx1P62960 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
Ybx1P62960 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ybx1P62960 Mir5132-201ENSMUST00000175166 71 ntBASIC13.43□□□□□ -0.26
Ybx1P62960 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ybx1P62960 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ybx1P62960 Gm6458-201ENSMUST00000211573 635 ntBASIC13.43□□□□□ -0.26
Ybx1P62960 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC13.43□□□□□ -0.26
Ybx1P62960 Mettl6-204ENSMUST00000227595 1027 ntBASIC13.43□□□□□ -0.26
Ybx1P62960 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ybx1P62960 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ybx1P62960 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ybx1P62960 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Ybx1P62960 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ybx1P62960 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ybx1P62960 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ybx1P62960 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ybx1P62960 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ybx1P62960 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ybx1P62960 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms