Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Nub1P54729 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nub1P54729 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nub1P54729 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nub1P54729 Abhd6-203ENSMUST00000225234 1958 ntBASIC14.18□□□□□ -0.14
Nub1P54729 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nub1P54729 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nub1P54729 Gm13612-201ENSMUST00000119276 390 ntBASIC14.18□□□□□ -0.14
Nub1P54729 Gm15806-201ENSMUST00000120696 955 ntBASIC14.18□□□□□ -0.14
Nub1P54729 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nub1P54729 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC14.18□□□□□ -0.14
Nub1P54729 Gm6244-201ENSMUST00000178732 841 ntBASIC14.18□□□□□ -0.14
Nub1P54729 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC14.18□□□□□ -0.14
Nub1P54729 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC14.18□□□□□ -0.14
Nub1P54729 AC134335.2-201ENSMUST00000227660 440 ntBASIC14.18□□□□□ -0.14
Nub1P54729 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC14.18□□□□□ -0.14
Nub1P54729 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nub1P54729 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nub1P54729 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nub1P54729 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nub1P54729 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nub1P54729 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nub1P54729 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nub1P54729 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nub1P54729 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nub1P54729 Gm38346-201ENSMUST00000192379 2639 ntBASIC14.18□□□□□ -0.14
Nub1P54729 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nub1P54729 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nub1P54729 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nub1P54729 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC14.17□□□□□ -0.14
Nub1P54729 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nub1P54729 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC14.17□□□□□ -0.14
Nub1P54729 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Nub1P54729 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nub1P54729 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nub1P54729 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nub1P54729 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nub1P54729 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nub1P54729 Gm5466-201ENSMUST00000119395 1890 ntBASIC14.17□□□□□ -0.14
Nub1P54729 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Nub1P54729 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Nub1P54729 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC14.17□□□□□ -0.14
Nub1P54729 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nub1P54729 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nub1P54729 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC14.17□□□□□ -0.14
Nub1P54729 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
Nub1P54729 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nub1P54729 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nub1P54729 Gm9002-201ENSMUST00000178437 499 ntBASIC14.17□□□□□ -0.14
Nub1P54729 Gm8598-201ENSMUST00000221184 836 ntBASIC14.17□□□□□ -0.14
Nub1P54729 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nub1P54729 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nub1P54729 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Nub1P54729 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nub1P54729 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nub1P54729 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nub1P54729 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nub1P54729 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Nub1P54729 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nub1P54729 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC14.17□□□□□ -0.14
Nub1P54729 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nub1P54729 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Nub1P54729 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nub1P54729 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nub1P54729 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Nub1P54729 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nub1P54729 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nub1P54729 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nub1P54729 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nub1P54729 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Nub1P54729 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Nub1P54729 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nub1P54729 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nub1P54729 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nub1P54729 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nub1P54729 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Nub1P54729 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nub1P54729 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nub1P54729 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nub1P54729 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nub1P54729 Gm14350-201ENSMUST00000116642 640 ntBASIC14.16□□□□□ -0.14
Nub1P54729 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nub1P54729 Gm6161-201ENSMUST00000121942 1102 ntBASIC14.16□□□□□ -0.14
Nub1P54729 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nub1P54729 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Nub1P54729 Gm6254-201ENSMUST00000168178 1072 ntBASIC14.16□□□□□ -0.14
Nub1P54729 Gm6153-201ENSMUST00000172004 1058 ntBASIC14.16□□□□□ -0.14
Nub1P54729 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Nub1P54729 Gm27892-201ENSMUST00000185017 106 ntBASIC14.16□□□□□ -0.14
Nub1P54729 Gm5641-202ENSMUST00000198699 1080 ntBASIC14.16□□□□□ -0.14
Nub1P54729 Gm38671-201ENSMUST00000200573 130 ntBASIC14.16□□□□□ -0.14
Nub1P54729 Gm7067-201ENSMUST00000207698 1249 ntBASIC14.16□□□□□ -0.14
Nub1P54729 Gm5035-201ENSMUST00000215581 927 ntBASIC14.16□□□□□ -0.14
Nub1P54729 CT573086.1-201ENSMUST00000227202 1074 ntBASIC14.16□□□□□ -0.14
Nub1P54729 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nub1P54729 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nub1P54729 Gm5356-201ENSMUST00000093326 615 ntBASIC14.16□□□□□ -0.14
Nub1P54729 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Nub1P54729 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nub1P54729 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms