Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Fdft1P53798 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fdft1P53798 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC13.15□□□□□ -0.3
Fdft1P53798 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fdft1P53798 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fdft1P53798 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fdft1P53798 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fdft1P53798 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fdft1P53798 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fdft1P53798 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Fdft1P53798 Gm15678-201ENSMUST00000117573 960 ntBASIC13.15□□□□□ -0.3
Fdft1P53798 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Fdft1P53798 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Fdft1P53798 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fdft1P53798 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fdft1P53798 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Fdft1P53798 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fdft1P53798 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Fdft1P53798 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fdft1P53798 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fdft1P53798 Gm2423-201ENSMUST00000074863 733 ntBASIC13.15□□□□□ -0.3
Fdft1P53798 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fdft1P53798 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Fdft1P53798 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fdft1P53798 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC13.15□□□□□ -0.3
Fdft1P53798 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fdft1P53798 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Fdft1P53798 AC154527.2-201ENSMUST00000225256 1466 ntBASIC13.15□□□□□ -0.3
Fdft1P53798 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fdft1P53798 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Fdft1P53798 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fdft1P53798 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Fdft1P53798 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Fdft1P53798 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.31
Fdft1P53798 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Fdft1P53798 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.31
Fdft1P53798 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Fdft1P53798 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC13.14□□□□□ -0.31
Fdft1P53798 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Fdft1P53798 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Fdft1P53798 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Fdft1P53798 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Fdft1P53798 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Fdft1P53798 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Fdft1P53798 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Fdft1P53798 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Fdft1P53798 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Fdft1P53798 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Fdft1P53798 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Fdft1P53798 Ldha-ps-201ENSMUST00000119390 995 ntBASIC13.14□□□□□ -0.31
Fdft1P53798 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC13.14□□□□□ -0.31
Fdft1P53798 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Fdft1P53798 Gm27437-201ENSMUST00000183429 107 ntBASIC13.14□□□□□ -0.31
Fdft1P53798 Gm29608-201ENSMUST00000190444 463 ntBASIC13.14□□□□□ -0.31
Fdft1P53798 Gm38144-201ENSMUST00000192790 465 ntBASIC13.14□□□□□ -0.31
Fdft1P53798 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC13.14□□□□□ -0.31
Fdft1P53798 Gm19220-201ENSMUST00000222682 803 ntBASIC13.14□□□□□ -0.31
Fdft1P53798 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Fdft1P53798 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Fdft1P53798 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Fdft1P53798 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Fdft1P53798 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Fdft1P53798 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Fdft1P53798 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Fdft1P53798 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Fdft1P53798 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Fdft1P53798 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Fdft1P53798 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Fdft1P53798 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Fdft1P53798 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Fdft1P53798 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Fdft1P53798 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Fdft1P53798 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Fdft1P53798 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Fdft1P53798 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Fdft1P53798 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Fdft1P53798 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Fdft1P53798 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Fdft1P53798 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Fdft1P53798 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Fdft1P53798 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Fdft1P53798 Gm12416-201ENSMUST00000120911 1008 ntBASIC13.13□□□□□ -0.31
Fdft1P53798 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Fdft1P53798 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC13.13□□□□□ -0.31
Fdft1P53798 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Fdft1P53798 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Fdft1P53798 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Fdft1P53798 Gm28631-201ENSMUST00000190740 334 ntBASIC13.13□□□□□ -0.31
Fdft1P53798 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC13.13□□□□□ -0.31
Fdft1P53798 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Fdft1P53798 AC192088.1-201ENSMUST00000227561 301 ntBASIC13.13□□□□□ -0.31
Fdft1P53798 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Fdft1P53798 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Fdft1P53798 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC13.13□□□□□ -0.31
Fdft1P53798 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Fdft1P53798 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC13.13□□□□□ -0.31
Fdft1P53798 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
Fdft1P53798 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC13.13□□□□□ -0.31
Fdft1P53798 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Fdft1P53798 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms