Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.7□□□□□ -0.38
Tnfsf4P43488 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tnfsf4P43488 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Tnfsf4P43488 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tnfsf4P43488 Gm6263-201ENSMUST00000120029 1342 ntBASIC12.7□□□□□ -0.38
Tnfsf4P43488 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Tnfsf4P43488 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tnfsf4P43488 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tnfsf4P43488 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tnfsf4P43488 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tnfsf4P43488 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
Tnfsf4P43488 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Tnfsf4P43488 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC12.7□□□□□ -0.38
Tnfsf4P43488 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC12.7□□□□□ -0.38
Tnfsf4P43488 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.7□□□□□ -0.38
Tnfsf4P43488 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Tnfsf4P43488 Gm27989-201ENSMUST00000184721 107 ntBASIC12.7□□□□□ -0.38
Tnfsf4P43488 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Tnfsf4P43488 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tnfsf4P43488 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tnfsf4P43488 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.7□□□□□ -0.38
Tnfsf4P43488 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tnfsf4P43488 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tnfsf4P43488 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC12.7□□□□□ -0.38
Tnfsf4P43488 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Tnfsf4P43488 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tnfsf4P43488 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tnfsf4P43488 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tnfsf4P43488 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.7□□□□□ -0.38
Tnfsf4P43488 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tnfsf4P43488 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.7□□□□□ -0.38
Tnfsf4P43488 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Tnfsf4P43488 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Tnfsf4P43488 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tnfsf4P43488 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tnfsf4P43488 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tnfsf4P43488 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.69□□□□□ -0.38
Tnfsf4P43488 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Tnfsf4P43488 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tnfsf4P43488 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tnfsf4P43488 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tnfsf4P43488 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tnfsf4P43488 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Tnfsf4P43488 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tnfsf4P43488 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tnfsf4P43488 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tnfsf4P43488 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
Tnfsf4P43488 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.69□□□□□ -0.38
Tnfsf4P43488 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tnfsf4P43488 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
Tnfsf4P43488 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
Tnfsf4P43488 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tnfsf4P43488 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tnfsf4P43488 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Tnfsf4P43488 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Tnfsf4P43488 Gm29667-201ENSMUST00000190817 490 ntBASIC12.69□□□□□ -0.38
Tnfsf4P43488 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.69□□□□□ -0.38
Tnfsf4P43488 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tnfsf4P43488 Gm9797-201ENSMUST00000052902 613 ntBASIC12.69□□□□□ -0.38
Tnfsf4P43488 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC12.69□□□□□ -0.38
Tnfsf4P43488 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tnfsf4P43488 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tnfsf4P43488 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tnfsf4P43488 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tnfsf4P43488 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tnfsf4P43488 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tnfsf4P43488 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tnfsf4P43488 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Tnfsf4P43488 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tnfsf4P43488 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Tnfsf4P43488 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.69□□□□□ -0.38
Tnfsf4P43488 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tnfsf4P43488 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tnfsf4P43488 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.69□□□□□ -0.38
Tnfsf4P43488 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tnfsf4P43488 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.69□□□□□ -0.38
Tnfsf4P43488 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.69□□□□□ -0.38
Tnfsf4P43488 Gm21038-201ENSMUST00000222205 1383 ntBASIC12.69□□□□□ -0.38
Tnfsf4P43488 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfsf4P43488 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Tnfsf4P43488 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.68□□□□□ -0.38
Tnfsf4P43488 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfsf4P43488 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfsf4P43488 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfsf4P43488 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC12.68□□□□□ -0.38
Tnfsf4P43488 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfsf4P43488 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfsf4P43488 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfsf4P43488 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfsf4P43488 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
Tnfsf4P43488 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfsf4P43488 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfsf4P43488 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfsf4P43488 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Tnfsf4P43488 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Tnfsf4P43488 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfsf4P43488 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfsf4P43488 Gm15487-201ENSMUST00000122373 465 ntBASIC12.68□□□□□ -0.38
Tnfsf4P43488 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.68□□□□□ -0.38
Tnfsf4P43488 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms