Protein–RNA interactions for Protein: P40630

Tfam, Transcription factor A, mitochondrial, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TfamP40630 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
TfamP40630 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
TfamP40630 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
TfamP40630 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TfamP40630 Gm15920-201ENSMUST00000118998 402 ntBASIC12.75□□□□□ -0.37
TfamP40630 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
TfamP40630 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
TfamP40630 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
TfamP40630 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
TfamP40630 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
TfamP40630 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
TfamP40630 Gm29608-201ENSMUST00000190444 463 ntBASIC12.75□□□□□ -0.37
TfamP40630 Gm31326-201ENSMUST00000191856 1048 ntBASIC12.75□□□□□ -0.37
TfamP40630 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
TfamP40630 Gm21038-201ENSMUST00000222205 1383 ntBASIC12.75□□□□□ -0.37
TfamP40630 Syt7-204ENSMUST00000223586 1344 ntBASIC12.75□□□□□ -0.37
TfamP40630 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TfamP40630 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TfamP40630 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
TfamP40630 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TfamP40630 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TfamP40630 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
TfamP40630 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
TfamP40630 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TfamP40630 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
TfamP40630 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TfamP40630 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
TfamP40630 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
TfamP40630 Mbnl2-204ENSMUST00000227012 2390 ntBASIC12.74□□□□□ -0.37
TfamP40630 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
TfamP40630 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
TfamP40630 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TfamP40630 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TfamP40630 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TfamP40630 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
TfamP40630 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
TfamP40630 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
TfamP40630 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
TfamP40630 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TfamP40630 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.74□□□□□ -0.37
TfamP40630 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
TfamP40630 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
TfamP40630 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
TfamP40630 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TfamP40630 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TfamP40630 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
TfamP40630 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
TfamP40630 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TfamP40630 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC12.74□□□□□ -0.37
TfamP40630 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
TfamP40630 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC12.74□□□□□ -0.37
TfamP40630 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC12.74□□□□□ -0.37
TfamP40630 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
TfamP40630 Gm45195-201ENSMUST00000205597 1008 ntBASIC12.74□□□□□ -0.37
TfamP40630 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
TfamP40630 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC12.74□□□□□ -0.37
TfamP40630 AC155258.1-201ENSMUST00000219303 253 ntBASIC12.74□□□□□ -0.37
TfamP40630 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
TfamP40630 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TfamP40630 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
TfamP40630 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TfamP40630 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
TfamP40630 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
TfamP40630 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.74□□□□□ -0.37
TfamP40630 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TfamP40630 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
TfamP40630 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
TfamP40630 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TfamP40630 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
TfamP40630 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TfamP40630 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TfamP40630 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TfamP40630 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TfamP40630 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TfamP40630 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TfamP40630 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.73□□□□□ -0.37
TfamP40630 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TfamP40630 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
TfamP40630 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
TfamP40630 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
TfamP40630 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TfamP40630 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
TfamP40630 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
TfamP40630 Gm22189-201ENSMUST00000103822 86 ntBASIC12.73□□□□□ -0.37
TfamP40630 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
TfamP40630 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC12.73□□□□□ -0.37
TfamP40630 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
TfamP40630 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TfamP40630 Mir7023-201ENSMUST00000185093 64 ntBASIC12.73□□□□□ -0.37
TfamP40630 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
TfamP40630 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC12.73□□□□□ -0.37
TfamP40630 AC073947.2-201ENSMUST00000215888 1130 ntBASIC12.73□□□□□ -0.37
TfamP40630 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TfamP40630 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TfamP40630 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TfamP40630 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
TfamP40630 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TfamP40630 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TfamP40630 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
TfamP40630 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms