Protein–RNA interactions for Protein: P32043

Hoxc5, Homeobox protein Hox-C5, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc5P32043 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hoxc5P32043 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hoxc5P32043 Gm21038-201ENSMUST00000222205 1383 ntBASIC12.21□□□□□ -0.45
Hoxc5P32043 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC12.21□□□□□ -0.45
Hoxc5P32043 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hoxc5P32043 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hoxc5P32043 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hoxc5P32043 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hoxc5P32043 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Hoxc5P32043 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hoxc5P32043 Gm22189-201ENSMUST00000103822 86 ntBASIC12.21□□□□□ -0.45
Hoxc5P32043 Gm11524-201ENSMUST00000119349 807 ntBASIC12.21□□□□□ -0.45
Hoxc5P32043 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC12.21□□□□□ -0.45
Hoxc5P32043 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hoxc5P32043 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC12.21□□□□□ -0.45
Hoxc5P32043 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC12.21□□□□□ -0.45
Hoxc5P32043 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Hoxc5P32043 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC12.21□□□□□ -0.45
Hoxc5P32043 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.21□□□□□ -0.45
Hoxc5P32043 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC12.21□□□□□ -0.45
Hoxc5P32043 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hoxc5P32043 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hoxc5P32043 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hoxc5P32043 Hist1h2al-201ENSMUST00000091708 339 ntBASIC12.21□□□□□ -0.45
Hoxc5P32043 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Hoxc5P32043 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hoxc5P32043 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hoxc5P32043 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hoxc5P32043 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.21□□□□□ -0.45
Hoxc5P32043 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hoxc5P32043 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Hoxc5P32043 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Hoxc5P32043 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Hoxc5P32043 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Hoxc5P32043 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Hoxc5P32043 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.21□□□□□ -0.46
Hoxc5P32043 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Hoxc5P32043 Ldb3-207ENSMUST00000227819 1499 ntBASIC12.21□□□□□ -0.46
Hoxc5P32043 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Hoxc5P32043 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Hoxc5P32043 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Hoxc5P32043 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxc5P32043 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxc5P32043 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Hoxc5P32043 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Hoxc5P32043 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxc5P32043 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxc5P32043 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxc5P32043 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxc5P32043 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxc5P32043 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxc5P32043 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.2□□□□□ -0.46
Hoxc5P32043 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxc5P32043 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Hoxc5P32043 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxc5P32043 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxc5P32043 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.2□□□□□ -0.46
Hoxc5P32043 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxc5P32043 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC12.2□□□□□ -0.46
Hoxc5P32043 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC12.2□□□□□ -0.46
Hoxc5P32043 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC12.2□□□□□ -0.46
Hoxc5P32043 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC12.2□□□□□ -0.46
Hoxc5P32043 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.2□□□□□ -0.46
Hoxc5P32043 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC12.2□□□□□ -0.46
Hoxc5P32043 Gm45841-201ENSMUST00000207700 164 ntBASIC12.2□□□□□ -0.46
Hoxc5P32043 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC12.2□□□□□ -0.46
Hoxc5P32043 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxc5P32043 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxc5P32043 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxc5P32043 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxc5P32043 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Hoxc5P32043 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.2□□□□□ -0.46
Hoxc5P32043 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxc5P32043 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Hoxc5P32043 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxc5P32043 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxc5P32043 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxc5P32043 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxc5P32043 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC12.2□□□□□ -0.46
Hoxc5P32043 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
Hoxc5P32043 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxc5P32043 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxc5P32043 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxc5P32043 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxc5P32043 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Hoxc5P32043 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxc5P32043 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxc5P32043 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxc5P32043 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxc5P32043 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxc5P32043 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxc5P32043 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.19□□□□□ -0.46
Hoxc5P32043 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxc5P32043 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC12.19□□□□□ -0.46
Hoxc5P32043 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Hoxc5P32043 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC12.19□□□□□ -0.46
Hoxc5P32043 Gm44855-201ENSMUST00000205725 362 ntBASIC12.19□□□□□ -0.46
Hoxc5P32043 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxc5P32043 Wdyhv1-203ENSMUST00000226889 394 ntBASIC12.19□□□□□ -0.46
Hoxc5P32043 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms