Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cd40lgP27548 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cd40lgP27548 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cd40lgP27548 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cd40lgP27548 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Cd40lgP27548 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cd40lgP27548 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cd40lgP27548 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Cd40lgP27548 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cd40lgP27548 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cd40lgP27548 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cd40lgP27548 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cd40lgP27548 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cd40lgP27548 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cd40lgP27548 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cd40lgP27548 Gm43321-201ENSMUST00000198897 2409 ntBASIC12.17□□□□□ -0.46
Cd40lgP27548 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cd40lgP27548 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cd40lgP27548 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cd40lgP27548 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cd40lgP27548 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Cd40lgP27548 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cd40lgP27548 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cd40lgP27548 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Cd40lgP27548 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cd40lgP27548 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cd40lgP27548 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cd40lgP27548 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cd40lgP27548 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Cd40lgP27548 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC12.16□□□□□ -0.46
Cd40lgP27548 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cd40lgP27548 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cd40lgP27548 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cd40lgP27548 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Cd40lgP27548 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Cd40lgP27548 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Cd40lgP27548 Gm12138-201ENSMUST00000122180 951 ntBASIC12.16□□□□□ -0.46
Cd40lgP27548 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Cd40lgP27548 Gm6983-201ENSMUST00000214912 628 ntBASIC12.16□□□□□ -0.46
Cd40lgP27548 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
Cd40lgP27548 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cd40lgP27548 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cd40lgP27548 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cd40lgP27548 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cd40lgP27548 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cd40lgP27548 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Cd40lgP27548 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cd40lgP27548 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Cd40lgP27548 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cd40lgP27548 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cd40lgP27548 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Cd40lgP27548 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Cd40lgP27548 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Cd40lgP27548 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cd40lgP27548 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.16□□□□□ -0.46
Cd40lgP27548 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cd40lgP27548 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cd40lgP27548 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cd40lgP27548 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cd40lgP27548 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cd40lgP27548 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cd40lgP27548 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Cd40lgP27548 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cd40lgP27548 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cd40lgP27548 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cd40lgP27548 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cd40lgP27548 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cd40lgP27548 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cd40lgP27548 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cd40lgP27548 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cd40lgP27548 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cd40lgP27548 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cd40lgP27548 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cd40lgP27548 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Cd40lgP27548 Gm4780-202ENSMUST00000215200 2644 ntBASIC12.15□□□□□ -0.46
Cd40lgP27548 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.15□□□□□ -0.46
Cd40lgP27548 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.15□□□□□ -0.46
Cd40lgP27548 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Cd40lgP27548 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Cd40lgP27548 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cd40lgP27548 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cd40lgP27548 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cd40lgP27548 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cd40lgP27548 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cd40lgP27548 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cd40lgP27548 Gm12960-201ENSMUST00000120017 1066 ntBASIC12.15□□□□□ -0.46
Cd40lgP27548 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cd40lgP27548 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cd40lgP27548 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cd40lgP27548 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cd40lgP27548 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cd40lgP27548 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Cd40lgP27548 AC159006.1-201ENSMUST00000226396 258 ntBASIC12.15□□□□□ -0.46
Cd40lgP27548 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cd40lgP27548 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cd40lgP27548 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cd40lgP27548 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cd40lgP27548 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cd40lgP27548 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cd40lgP27548 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms