Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC10.9□□□□□ -0.66
Tnfrsf9P20334 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfrsf9P20334 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Tnfrsf9P20334 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfrsf9P20334 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfrsf9P20334 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC10.9□□□□□ -0.66
Tnfrsf9P20334 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC10.9□□□□□ -0.66
Tnfrsf9P20334 AC110817.1-201ENSMUST00000225706 605 ntBASIC10.9□□□□□ -0.66
Tnfrsf9P20334 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Tnfrsf9P20334 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Tnfrsf9P20334 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfrsf9P20334 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC10.9□□□□□ -0.66
Tnfrsf9P20334 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfrsf9P20334 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Tnfrsf9P20334 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfrsf9P20334 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfrsf9P20334 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfrsf9P20334 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Tnfrsf9P20334 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Tnfrsf9P20334 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfrsf9P20334 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.67
Tnfrsf9P20334 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Tnfrsf9P20334 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Tnfrsf9P20334 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC10.9□□□□□ -0.67
Tnfrsf9P20334 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Tnfrsf9P20334 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Tnfrsf9P20334 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfrsf9P20334 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfrsf9P20334 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfrsf9P20334 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfrsf9P20334 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfrsf9P20334 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfrsf9P20334 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfrsf9P20334 CT009713.10-201ENSMUST00000225013 1986 ntBASIC10.89□□□□□ -0.67
Tnfrsf9P20334 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfrsf9P20334 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfrsf9P20334 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfrsf9P20334 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC10.89□□□□□ -0.67
Tnfrsf9P20334 Gm5940-201ENSMUST00000117582 1068 ntBASIC10.89□□□□□ -0.67
Tnfrsf9P20334 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfrsf9P20334 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC10.89□□□□□ -0.67
Tnfrsf9P20334 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC10.89□□□□□ -0.67
Tnfrsf9P20334 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfrsf9P20334 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC10.89□□□□□ -0.67
Tnfrsf9P20334 Gm15429-201ENSMUST00000151268 798 ntBASIC10.89□□□□□ -0.67
Tnfrsf9P20334 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfrsf9P20334 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfrsf9P20334 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfrsf9P20334 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfrsf9P20334 Gm6283-201ENSMUST00000182369 1000 ntBASIC10.89□□□□□ -0.67
Tnfrsf9P20334 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC10.89□□□□□ -0.67
Tnfrsf9P20334 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC10.89□□□□□ -0.67
Tnfrsf9P20334 Gm4959-201ENSMUST00000197271 1044 ntBASIC10.89□□□□□ -0.67
Tnfrsf9P20334 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfrsf9P20334 Gm45166-201ENSMUST00000209073 683 ntBASIC10.89□□□□□ -0.67
Tnfrsf9P20334 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfrsf9P20334 Gm7172-201ENSMUST00000218047 1152 ntBASIC10.89□□□□□ -0.67
Tnfrsf9P20334 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC10.89□□□□□ -0.67
Tnfrsf9P20334 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC10.89□□□□□ -0.67
Tnfrsf9P20334 AC114573.1-201ENSMUST00000224120 1210 ntBASIC10.89□□□□□ -0.67
Tnfrsf9P20334 Gm7399-201ENSMUST00000032395 858 ntBASIC10.89□□□□□ -0.67
Tnfrsf9P20334 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfrsf9P20334 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Tnfrsf9P20334 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfrsf9P20334 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfrsf9P20334 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfrsf9P20334 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfrsf9P20334 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfrsf9P20334 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfrsf9P20334 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfrsf9P20334 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfrsf9P20334 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfrsf9P20334 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfrsf9P20334 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfrsf9P20334 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfrsf9P20334 AC121870.2-201ENSMUST00000214343 1870 ntBASIC10.89□□□□□ -0.67
Tnfrsf9P20334 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfrsf9P20334 Crebrf-203ENSMUST00000142539 2674 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfrsf9P20334 AC122881.1-201ENSMUST00000225757 2695 ntBASIC10.89□□□□□ -0.67
Tnfrsf9P20334 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfrsf9P20334 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfrsf9P20334 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Tnfrsf9P20334 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfrsf9P20334 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfrsf9P20334 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Tnfrsf9P20334 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC10.88□□□□□ -0.67
Tnfrsf9P20334 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Tnfrsf9P20334 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC10.88□□□□□ -0.67
Tnfrsf9P20334 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC10.88□□□□□ -0.67
Tnfrsf9P20334 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tnfrsf9P20334 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Tnfrsf9P20334 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Tnfrsf9P20334 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tnfrsf9P20334 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tnfrsf9P20334 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tnfrsf9P20334 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Tnfrsf9P20334 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC10.88□□□□□ -0.67
Tnfrsf9P20334 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC10.88□□□□□ -0.67
Tnfrsf9P20334 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC10.88□□□□□ -0.67
Tnfrsf9P20334 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms