Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Hmgn1P18608 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hmgn1P18608 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hmgn1P18608 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hmgn1P18608 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hmgn1P18608 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Hmgn1P18608 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Hmgn1P18608 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC12.03□□□□□ -0.48
Hmgn1P18608 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
Hmgn1P18608 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC12.03□□□□□ -0.48
Hmgn1P18608 Gm27680-201ENSMUST00000184192 160 ntBASIC12.03□□□□□ -0.48
Hmgn1P18608 Gm27525-201ENSMUST00000184465 107 ntBASIC12.03□□□□□ -0.48
Hmgn1P18608 Gm5312-201ENSMUST00000203728 547 ntBASIC12.03□□□□□ -0.48
Hmgn1P18608 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Hmgn1P18608 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC12.03□□□□□ -0.48
Hmgn1P18608 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.03□□□□□ -0.48
Hmgn1P18608 AC225888.1-201ENSMUST00000227184 728 ntBASIC12.03□□□□□ -0.48
Hmgn1P18608 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hmgn1P18608 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hmgn1P18608 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.03□□□□□ -0.48
Hmgn1P18608 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Hmgn1P18608 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hmgn1P18608 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hmgn1P18608 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hmgn1P18608 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hmgn1P18608 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Hmgn1P18608 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.03□□□□□ -0.48
Hmgn1P18608 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hmgn1P18608 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC12.03□□□□□ -0.48
Hmgn1P18608 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Hmgn1P18608 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Hmgn1P18608 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.03□□□□□ -0.48
Hmgn1P18608 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Hmgn1P18608 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hmgn1P18608 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Hmgn1P18608 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.02□□□□□ -0.48
Hmgn1P18608 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Hmgn1P18608 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Hmgn1P18608 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Hmgn1P18608 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hmgn1P18608 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hmgn1P18608 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hmgn1P18608 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Hmgn1P18608 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Hmgn1P18608 Gm38037-201ENSMUST00000192600 1624 ntBASIC12.02□□□□□ -0.49
Hmgn1P18608 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hmgn1P18608 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC12.02□□□□□ -0.49
Hmgn1P18608 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC12.02□□□□□ -0.49
Hmgn1P18608 Gm14767-201ENSMUST00000121559 586 ntBASIC12.02□□□□□ -0.49
Hmgn1P18608 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hmgn1P18608 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
Hmgn1P18608 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Hmgn1P18608 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Hmgn1P18608 Gm17795-201ENSMUST00000214505 757 ntBASIC12.02□□□□□ -0.49
Hmgn1P18608 AC159114.1-201ENSMUST00000220349 266 ntBASIC12.02□□□□□ -0.49
Hmgn1P18608 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Hmgn1P18608 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hmgn1P18608 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Hmgn1P18608 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hmgn1P18608 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hmgn1P18608 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hmgn1P18608 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hmgn1P18608 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hmgn1P18608 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hmgn1P18608 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Hmgn1P18608 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hmgn1P18608 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hmgn1P18608 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Hmgn1P18608 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Hmgn1P18608 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hmgn1P18608 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.02□□□□□ -0.49
Hmgn1P18608 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Hmgn1P18608 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Hmgn1P18608 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.01□□□□□ -0.49
Hmgn1P18608 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.01□□□□□ -0.49
Hmgn1P18608 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hmgn1P18608 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Hmgn1P18608 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hmgn1P18608 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hmgn1P18608 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Hmgn1P18608 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hmgn1P18608 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Hmgn1P18608 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC12.01□□□□□ -0.49
Hmgn1P18608 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Hmgn1P18608 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hmgn1P18608 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Hmgn1P18608 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC12.01□□□□□ -0.49
Hmgn1P18608 AC154846.1-201ENSMUST00000226278 862 ntBASIC12.01□□□□□ -0.49
Hmgn1P18608 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.01□□□□□ -0.49
Hmgn1P18608 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hmgn1P18608 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hmgn1P18608 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Hmgn1P18608 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hmgn1P18608 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
Hmgn1P18608 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Hmgn1P18608 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hmgn1P18608 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Hmgn1P18608 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hmgn1P18608 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hmgn1P18608 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms