Protein–RNA interactions for Protein: P14576

Srp54, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54P14576 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Srp54P14576 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC12.95□□□□□ -0.34
Srp54P14576 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
Srp54P14576 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC12.95□□□□□ -0.34
Srp54P14576 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Srp54P14576 Gm10146-201ENSMUST00000072739 309 ntBASIC12.95□□□□□ -0.34
Srp54P14576 Gm10268-201ENSMUST00000085340 555 ntBASIC12.95□□□□□ -0.34
Srp54P14576 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Srp54P14576 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Srp54P14576 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Srp54P14576 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Srp54P14576 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Srp54P14576 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Srp54P14576 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Srp54P14576 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Srp54P14576 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Srp54P14576 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Srp54P14576 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Srp54P14576 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.95□□□□□ -0.34
Srp54P14576 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Srp54P14576 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Srp54P14576 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Srp54P14576 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC12.94□□□□□ -0.34
Srp54P14576 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Srp54P14576 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Srp54P14576 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Srp54P14576 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Srp54P14576 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Srp54P14576 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Srp54P14576 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Srp54P14576 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Srp54P14576 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Srp54P14576 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC12.94□□□□□ -0.34
Srp54P14576 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Srp54P14576 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Srp54P14576 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Srp54P14576 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Srp54P14576 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Srp54P14576 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Srp54P14576 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Srp54P14576 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC12.94□□□□□ -0.34
Srp54P14576 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC12.94□□□□□ -0.34
Srp54P14576 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Srp54P14576 Gm44985-201ENSMUST00000206202 1016 ntBASIC12.94□□□□□ -0.34
Srp54P14576 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC12.94□□□□□ -0.34
Srp54P14576 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Srp54P14576 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
Srp54P14576 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Srp54P14576 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Srp54P14576 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Srp54P14576 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
Srp54P14576 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Srp54P14576 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Srp54P14576 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Srp54P14576 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Srp54P14576 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Srp54P14576 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Srp54P14576 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Srp54P14576 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Srp54P14576 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Srp54P14576 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.94□□□□□ -0.34
Srp54P14576 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Srp54P14576 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Srp54P14576 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Srp54P14576 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Srp54P14576 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.93□□□□□ -0.34
Srp54P14576 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Srp54P14576 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Srp54P14576 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Srp54P14576 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC12.93□□□□□ -0.34
Srp54P14576 Gm13123-201ENSMUST00000122173 492 ntBASIC12.93□□□□□ -0.34
Srp54P14576 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Srp54P14576 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.93□□□□□ -0.34
Srp54P14576 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC12.93□□□□□ -0.34
Srp54P14576 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Srp54P14576 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC12.93□□□□□ -0.34
Srp54P14576 Gm44974-201ENSMUST00000206387 1279 ntBASIC12.93□□□□□ -0.34
Srp54P14576 Gm45331-201ENSMUST00000209868 554 ntBASIC12.93□□□□□ -0.34
Srp54P14576 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Srp54P14576 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.93□□□□□ -0.34
Srp54P14576 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Srp54P14576 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Srp54P14576 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC12.93□□□□□ -0.34
Srp54P14576 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC12.93□□□□□ -0.34
Srp54P14576 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC12.93□□□□□ -0.34
Srp54P14576 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Srp54P14576 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Srp54P14576 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Srp54P14576 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Srp54P14576 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Srp54P14576 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Srp54P14576 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.93□□□□□ -0.34
Srp54P14576 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Srp54P14576 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Srp54P14576 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Srp54P14576 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Srp54P14576 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Srp54P14576 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Srp54P14576 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Srp54P14576 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms