Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccl1P10146 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Ccl1P10146 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Ccl1P10146 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC10.17□□□□□ -0.78
Ccl1P10146 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC10.17□□□□□ -0.78
Ccl1P10146 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Ccl1P10146 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC10.17□□□□□ -0.78
Ccl1P10146 Mir8098-201ENSMUST00000184011 137 ntBASIC10.17□□□□□ -0.78
Ccl1P10146 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Ccl1P10146 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccl1P10146 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
Ccl1P10146 AC159295.1-201ENSMUST00000225326 940 ntBASIC10.17□□□□□ -0.78
Ccl1P10146 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccl1P10146 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Ccl1P10146 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Ccl1P10146 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccl1P10146 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC10.17□□□□□ -0.78
Ccl1P10146 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccl1P10146 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Ccl1P10146 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccl1P10146 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccl1P10146 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccl1P10146 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccl1P10146 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Ccl1P10146 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccl1P10146 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Ccl1P10146 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Ccl1P10146 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccl1P10146 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Ccl1P10146 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Ccl1P10146 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Ccl1P10146 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccl1P10146 Gm19817-201ENSMUST00000199764 2132 ntBASIC10.16□□□□□ -0.78
Ccl1P10146 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl1P10146 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl1P10146 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl1P10146 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl1P10146 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl1P10146 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl1P10146 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl1P10146 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl1P10146 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Ccl1P10146 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Ccl1P10146 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC10.16□□□□□ -0.78
Ccl1P10146 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl1P10146 Gm2810-201ENSMUST00000118681 990 ntBASIC10.16□□□□□ -0.78
Ccl1P10146 Gm11557-201ENSMUST00000120200 1008 ntBASIC10.16□□□□□ -0.78
Ccl1P10146 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Ccl1P10146 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Ccl1P10146 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Ccl1P10146 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl1P10146 Gm8927-201ENSMUST00000181978 981 ntBASIC10.16□□□□□ -0.78
Ccl1P10146 Mir7221-201ENSMUST00000184009 72 ntBASIC10.16□□□□□ -0.78
Ccl1P10146 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC10.16□□□□□ -0.78
Ccl1P10146 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Ccl1P10146 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl1P10146 Gm20553-201ENSMUST00000204205 844 ntBASIC10.16□□□□□ -0.78
Ccl1P10146 Gm45841-201ENSMUST00000207700 164 ntBASIC10.16□□□□□ -0.78
Ccl1P10146 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC10.16□□□□□ -0.78
Ccl1P10146 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC10.16□□□□□ -0.78
Ccl1P10146 AC154222.1-201ENSMUST00000223882 475 ntBASIC10.16□□□□□ -0.78
Ccl1P10146 AC093022.5-201ENSMUST00000226841 1079 ntBASIC10.16□□□□□ -0.78
Ccl1P10146 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl1P10146 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl1P10146 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl1P10146 Gpr146-202ENSMUST00000053120 1040 ntBASIC10.16□□□□□ -0.78
Ccl1P10146 Gm3222-201ENSMUST00000071282 990 ntBASIC10.16□□□□□ -0.78
Ccl1P10146 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl1P10146 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl1P10146 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC10.16□□□□□ -0.78
Ccl1P10146 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl1P10146 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl1P10146 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl1P10146 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl1P10146 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl1P10146 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl1P10146 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl1P10146 Gm37105-201ENSMUST00000192251 2085 ntBASIC10.16□□□□□ -0.78
Ccl1P10146 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC10.16□□□□□ -0.78
Ccl1P10146 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Ccl1P10146 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl1P10146 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl1P10146 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC10.16□□□□□ -0.78
Ccl1P10146 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Ccl1P10146 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl1P10146 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Ccl1P10146 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC10.16□□□□□ -0.78
Ccl1P10146 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl1P10146 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl1P10146 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Ccl1P10146 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Ccl1P10146 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Ccl1P10146 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Ccl1P10146 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Ccl1P10146 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Ccl1P10146 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Ccl1P10146 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Ccl1P10146 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC10.15□□□□□ -0.78
Ccl1P10146 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Ccl1P10146 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms