Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TnfP06804 Mir1247-201ENSMUST00000116706 82 ntBASIC13.93□□□□□ -0.18
TnfP06804 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC13.93□□□□□ -0.18
TnfP06804 Gm19931-201ENSMUST00000198920 368 ntBASIC13.93□□□□□ -0.18
TnfP06804 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TnfP06804 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TnfP06804 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TnfP06804 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TnfP06804 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TnfP06804 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
TnfP06804 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TnfP06804 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC13.93□□□□□ -0.18
TnfP06804 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
TnfP06804 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TnfP06804 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
TnfP06804 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TnfP06804 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
TnfP06804 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TnfP06804 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TnfP06804 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
TnfP06804 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TnfP06804 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TnfP06804 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TnfP06804 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
TnfP06804 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TnfP06804 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TnfP06804 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TnfP06804 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TnfP06804 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TnfP06804 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TnfP06804 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TnfP06804 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
TnfP06804 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TnfP06804 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC13.92□□□□□ -0.18
TnfP06804 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC13.92□□□□□ -0.18
TnfP06804 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC13.92□□□□□ -0.18
TnfP06804 Gm27516-201ENSMUST00000184237 98 ntBASIC13.92□□□□□ -0.18
TnfP06804 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
TnfP06804 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC13.92□□□□□ -0.18
TnfP06804 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TnfP06804 Gm45930-201ENSMUST00000221330 292 ntBASIC13.92□□□□□ -0.18
TnfP06804 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC13.92□□□□□ -0.18
TnfP06804 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TnfP06804 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
TnfP06804 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TnfP06804 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
TnfP06804 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TnfP06804 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TnfP06804 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC13.92□□□□□ -0.18
TnfP06804 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
TnfP06804 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TnfP06804 Gm5989-201ENSMUST00000096092 2077 ntBASIC13.92□□□□□ -0.18
TnfP06804 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
TnfP06804 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC13.92□□□□□ -0.18
TnfP06804 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
TnfP06804 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TnfP06804 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TnfP06804 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC13.92□□□□□ -0.18
TnfP06804 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
TnfP06804 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TnfP06804 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC13.91□□□□□ -0.18
TnfP06804 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TnfP06804 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.91□□□□□ -0.18
TnfP06804 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC13.91□□□□□ -0.18
TnfP06804 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
TnfP06804 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
TnfP06804 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TnfP06804 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TnfP06804 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC13.91□□□□□ -0.18
TnfP06804 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC13.91□□□□□ -0.18
TnfP06804 Gm11793-201ENSMUST00000120433 981 ntBASIC13.91□□□□□ -0.18
TnfP06804 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TnfP06804 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC13.91□□□□□ -0.18
TnfP06804 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TnfP06804 Gm18935-201ENSMUST00000212692 664 ntBASIC13.91□□□□□ -0.18
TnfP06804 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TnfP06804 Gm17383-201ENSMUST00000078739 1041 ntBASIC13.91□□□□□ -0.18
TnfP06804 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
TnfP06804 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TnfP06804 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
TnfP06804 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
TnfP06804 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
TnfP06804 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TnfP06804 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TnfP06804 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TnfP06804 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC13.91□□□□□ -0.18
TnfP06804 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TnfP06804 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
TnfP06804 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TnfP06804 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TnfP06804 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC13.9□□□□□ -0.18
TnfP06804 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TnfP06804 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TnfP06804 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TnfP06804 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TnfP06804 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
TnfP06804 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TnfP06804 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
TnfP06804 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.9□□□□□ -0.18
TnfP06804 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms