Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P06344 Gm43273-201ENSMUST00000199649 2594 ntBASIC11.74□□□□□ -0.53
P06344 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P06344 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
P06344 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
P06344 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
P06344 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
P06344 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
P06344 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
P06344 Gm14660-201ENSMUST00000119809 575 ntBASIC11.73□□□□□ -0.53
P06344 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC11.73□□□□□ -0.53
P06344 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
P06344 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC11.73□□□□□ -0.53
P06344 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
P06344 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
P06344 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
P06344 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
P06344 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
P06344 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
P06344 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
P06344 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
P06344 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
P06344 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC11.73□□□□□ -0.53
P06344 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
P06344 AY702102-202ENSMUST00000194651 1173 ntBASIC11.73□□□□□ -0.53
P06344 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC11.73□□□□□ -0.53
P06344 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
P06344 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
P06344 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
P06344 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
P06344 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC11.73□□□□□ -0.53
P06344 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
P06344 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
P06344 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
P06344 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
P06344 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
P06344 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC11.73□□□□□ -0.53
P06344 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
P06344 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
P06344 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC11.73□□□□□ -0.53
P06344 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
P06344 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P06344 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P06344 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P06344 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
P06344 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P06344 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
P06344 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
P06344 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC11.72□□□□□ -0.53
P06344 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P06344 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P06344 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P06344 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
P06344 Gm16202-201ENSMUST00000117532 544 ntBASIC11.72□□□□□ -0.53
P06344 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P06344 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC11.72□□□□□ -0.53
P06344 Gm4271-201ENSMUST00000174444 973 ntBASIC11.72□□□□□ -0.53
P06344 Gm27731-201ENSMUST00000185192 107 ntBASIC11.72□□□□□ -0.53
P06344 Gm37922-201ENSMUST00000195596 455 ntBASIC11.72□□□□□ -0.53
P06344 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
P06344 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC11.72□□□□□ -0.53
P06344 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC11.72□□□□□ -0.53
P06344 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC11.72□□□□□ -0.53
P06344 Gm44069-201ENSMUST00000204898 506 ntBASIC11.72□□□□□ -0.53
P06344 AC166349.1-201ENSMUST00000220866 695 ntBASIC11.72□□□□□ -0.53
P06344 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P06344 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
P06344 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P06344 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P06344 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P06344 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P06344 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
P06344 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
P06344 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P06344 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
P06344 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
P06344 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
P06344 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P06344 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
P06344 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
P06344 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC11.72□□□□□ -0.53
P06344 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
P06344 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P06344 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC11.72□□□□□ -0.53
P06344 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC11.71□□□□□ -0.53
P06344 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
P06344 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
P06344 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC11.71□□□□□ -0.53
P06344 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
P06344 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
P06344 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
P06344 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
P06344 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
P06344 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
P06344 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
P06344 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.53
P06344 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
P06344 Gm44414-201ENSMUST00000203660 2109 ntBASIC11.71□□□□□ -0.53
P06344 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
P06344 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms