Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cops4O88544 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cops4O88544 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.15□□□□□ -0.46
Cops4O88544 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cops4O88544 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cops4O88544 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Cops4O88544 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Cops4O88544 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.47
Cops4O88544 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Cops4O88544 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Cops4O88544 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Cops4O88544 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cops4O88544 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cops4O88544 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cops4O88544 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cops4O88544 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.14□□□□□ -0.47
Cops4O88544 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Cops4O88544 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cops4O88544 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.14□□□□□ -0.47
Cops4O88544 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Cops4O88544 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cops4O88544 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cops4O88544 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Cops4O88544 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cops4O88544 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cops4O88544 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.14□□□□□ -0.47
Cops4O88544 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cops4O88544 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cops4O88544 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cops4O88544 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cops4O88544 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
Cops4O88544 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
Cops4O88544 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cops4O88544 Gm26308-201ENSMUST00000157768 69 ntBASIC12.14□□□□□ -0.47
Cops4O88544 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC12.14□□□□□ -0.47
Cops4O88544 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cops4O88544 Mir7221-201ENSMUST00000184009 72 ntBASIC12.14□□□□□ -0.47
Cops4O88544 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC12.14□□□□□ -0.47
Cops4O88544 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cops4O88544 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Cops4O88544 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Cops4O88544 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Cops4O88544 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cops4O88544 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cops4O88544 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC12.14□□□□□ -0.47
Cops4O88544 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cops4O88544 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cops4O88544 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cops4O88544 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cops4O88544 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Cops4O88544 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cops4O88544 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cops4O88544 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cops4O88544 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cops4O88544 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cops4O88544 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cops4O88544 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cops4O88544 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cops4O88544 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cops4O88544 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cops4O88544 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cops4O88544 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cops4O88544 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cops4O88544 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.13□□□□□ -0.47
Cops4O88544 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cops4O88544 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cops4O88544 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cops4O88544 Gm15653-201ENSMUST00000119247 907 ntBASIC12.13□□□□□ -0.47
Cops4O88544 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Cops4O88544 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Cops4O88544 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Cops4O88544 Gm28630-201ENSMUST00000187806 498 ntBASIC12.13□□□□□ -0.47
Cops4O88544 Gm37935-201ENSMUST00000192012 982 ntBASIC12.13□□□□□ -0.47
Cops4O88544 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Cops4O88544 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC12.13□□□□□ -0.47
Cops4O88544 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Cops4O88544 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cops4O88544 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cops4O88544 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cops4O88544 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cops4O88544 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cops4O88544 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cops4O88544 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cops4O88544 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cops4O88544 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cops4O88544 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Cops4O88544 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cops4O88544 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cops4O88544 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cops4O88544 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cops4O88544 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Cops4O88544 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cops4O88544 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cops4O88544 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cops4O88544 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cops4O88544 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
Cops4O88544 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cops4O88544 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cops4O88544 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cops4O88544 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms