Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pdlim1O70400 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Pdlim1O70400 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pdlim1O70400 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pdlim1O70400 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pdlim1O70400 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pdlim1O70400 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Pdlim1O70400 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pdlim1O70400 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pdlim1O70400 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC13□□□□□ -0.33
Pdlim1O70400 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pdlim1O70400 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pdlim1O70400 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pdlim1O70400 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Pdlim1O70400 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pdlim1O70400 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Pdlim1O70400 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pdlim1O70400 Gm12203-201ENSMUST00000118235 598 ntBASIC13□□□□□ -0.33
Pdlim1O70400 Gm12209-201ENSMUST00000120089 596 ntBASIC13□□□□□ -0.33
Pdlim1O70400 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Pdlim1O70400 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pdlim1O70400 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC13□□□□□ -0.33
Pdlim1O70400 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC13□□□□□ -0.33
Pdlim1O70400 Gm27331-201ENSMUST00000183705 60 ntBASIC13□□□□□ -0.33
Pdlim1O70400 Gm38297-201ENSMUST00000195122 1057 ntBASIC13□□□□□ -0.33
Pdlim1O70400 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pdlim1O70400 AC132467.2-202ENSMUST00000227726 559 ntBASIC13□□□□□ -0.33
Pdlim1O70400 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC13□□□□□ -0.33
Pdlim1O70400 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pdlim1O70400 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Pdlim1O70400 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Pdlim1O70400 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13□□□□□ -0.33
Pdlim1O70400 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Pdlim1O70400 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Pdlim1O70400 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Pdlim1O70400 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pdlim1O70400 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pdlim1O70400 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Pdlim1O70400 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pdlim1O70400 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pdlim1O70400 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pdlim1O70400 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pdlim1O70400 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pdlim1O70400 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Pdlim1O70400 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pdlim1O70400 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pdlim1O70400 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pdlim1O70400 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Pdlim1O70400 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pdlim1O70400 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pdlim1O70400 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pdlim1O70400 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.99□□□□□ -0.33
Pdlim1O70400 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.99□□□□□ -0.33
Pdlim1O70400 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Pdlim1O70400 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pdlim1O70400 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pdlim1O70400 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pdlim1O70400 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pdlim1O70400 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pdlim1O70400 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pdlim1O70400 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Pdlim1O70400 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pdlim1O70400 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.99□□□□□ -0.33
Pdlim1O70400 Gm11637-201ENSMUST00000120601 592 ntBASIC12.99□□□□□ -0.33
Pdlim1O70400 Gm13123-201ENSMUST00000122173 492 ntBASIC12.99□□□□□ -0.33
Pdlim1O70400 Gm2231-201ENSMUST00000125661 612 ntBASIC12.99□□□□□ -0.33
Pdlim1O70400 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC12.99□□□□□ -0.33
Pdlim1O70400 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pdlim1O70400 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pdlim1O70400 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.99□□□□□ -0.33
Pdlim1O70400 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC12.99□□□□□ -0.33
Pdlim1O70400 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pdlim1O70400 Gm28693-202ENSMUST00000190758 331 ntBASIC12.99□□□□□ -0.33
Pdlim1O70400 AC130829.1-201ENSMUST00000221548 494 ntBASIC12.99□□□□□ -0.33
Pdlim1O70400 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pdlim1O70400 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pdlim1O70400 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pdlim1O70400 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pdlim1O70400 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Pdlim1O70400 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pdlim1O70400 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Pdlim1O70400 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pdlim1O70400 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pdlim1O70400 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pdlim1O70400 Gm43570-201ENSMUST00000199951 3688 ntBASIC12.99□□□□□ -0.33
Pdlim1O70400 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.99□□□□□ -0.33
Pdlim1O70400 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.99□□□□□ -0.33
Pdlim1O70400 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.99□□□□□ -0.33
Pdlim1O70400 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pdlim1O70400 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.98□□□□□ -0.33
Pdlim1O70400 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pdlim1O70400 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pdlim1O70400 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pdlim1O70400 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.98□□□□□ -0.33
Pdlim1O70400 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.98□□□□□ -0.33
Pdlim1O70400 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pdlim1O70400 Zscan30-202ENSMUST00000224144 1458 ntBASIC12.98□□□□□ -0.33
Pdlim1O70400 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pdlim1O70400 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Pdlim1O70400 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms