Protein–RNA interactions for Protein: O70174

Chrna4, Neuronal acetylcholine receptor subunit alpha-4, mousemouse

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna4O70174 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chrna4O70174 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chrna4O70174 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chrna4O70174 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Chrna4O70174 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC13.26□□□□□ -0.29
Chrna4O70174 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chrna4O70174 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chrna4O70174 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Chrna4O70174 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chrna4O70174 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chrna4O70174 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chrna4O70174 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Chrna4O70174 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chrna4O70174 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Chrna4O70174 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chrna4O70174 Gm16202-201ENSMUST00000117532 544 ntBASIC13.26□□□□□ -0.29
Chrna4O70174 Gm11978-201ENSMUST00000122315 466 ntBASIC13.26□□□□□ -0.29
Chrna4O70174 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chrna4O70174 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Chrna4O70174 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Chrna4O70174 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chrna4O70174 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC13.26□□□□□ -0.29
Chrna4O70174 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC13.26□□□□□ -0.29
Chrna4O70174 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chrna4O70174 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chrna4O70174 AC122305.4-201ENSMUST00000216159 1206 ntBASIC13.26□□□□□ -0.29
Chrna4O70174 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chrna4O70174 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chrna4O70174 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Chrna4O70174 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chrna4O70174 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chrna4O70174 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Chrna4O70174 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chrna4O70174 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chrna4O70174 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chrna4O70174 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Chrna4O70174 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Chrna4O70174 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chrna4O70174 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Chrna4O70174 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chrna4O70174 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chrna4O70174 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Chrna4O70174 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chrna4O70174 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chrna4O70174 Gm8798-201ENSMUST00000211877 1661 ntBASIC13.25□□□□□ -0.29
Chrna4O70174 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Chrna4O70174 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chrna4O70174 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chrna4O70174 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Chrna4O70174 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC13.25□□□□□ -0.29
Chrna4O70174 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chrna4O70174 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC13.25□□□□□ -0.29
Chrna4O70174 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC13.25□□□□□ -0.29
Chrna4O70174 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC13.25□□□□□ -0.29
Chrna4O70174 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC13.25□□□□□ -0.29
Chrna4O70174 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chrna4O70174 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Chrna4O70174 Gm6244-201ENSMUST00000178732 841 ntBASIC13.25□□□□□ -0.29
Chrna4O70174 Proscos-202ENSMUST00000178990 666 ntBASIC13.25□□□□□ -0.29
Chrna4O70174 Ighv5-13-201ENSMUST00000193550 290 ntBASIC13.25□□□□□ -0.29
Chrna4O70174 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Chrna4O70174 Gm7653-201ENSMUST00000214567 508 ntBASIC13.25□□□□□ -0.29
Chrna4O70174 AC154276.1-201ENSMUST00000228874 1299 ntBASIC13.25□□□□□ -0.29
Chrna4O70174 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chrna4O70174 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC13.25□□□□□ -0.29
Chrna4O70174 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Chrna4O70174 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Chrna4O70174 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Chrna4O70174 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chrna4O70174 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Chrna4O70174 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Chrna4O70174 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chrna4O70174 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chrna4O70174 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chrna4O70174 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chrna4O70174 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC13.25□□□□□ -0.29
Chrna4O70174 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC13.25□□□□□ -0.29
Chrna4O70174 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Chrna4O70174 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Chrna4O70174 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chrna4O70174 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chrna4O70174 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chrna4O70174 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chrna4O70174 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chrna4O70174 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chrna4O70174 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chrna4O70174 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chrna4O70174 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13.24□□□□□ -0.29
Chrna4O70174 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Chrna4O70174 Gm7002-201ENSMUST00000221386 2165 ntBASIC13.24□□□□□ -0.29
Chrna4O70174 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chrna4O70174 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chrna4O70174 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Chrna4O70174 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chrna4O70174 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chrna4O70174 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chrna4O70174 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chrna4O70174 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chrna4O70174 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chrna4O70174 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms