Protein–RNA interactions for Protein: O54804

Chka, Choline kinase alpha, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkaO54804 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
ChkaO54804 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC13.3□□□□□ -0.28
ChkaO54804 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
ChkaO54804 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ChkaO54804 Gm5354-201ENSMUST00000182417 973 ntBASIC13.3□□□□□ -0.28
ChkaO54804 Gm10576-201ENSMUST00000191927 825 ntBASIC13.3□□□□□ -0.28
ChkaO54804 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ChkaO54804 Rn7sk-201ENSMUST00000083103 331 ntBASIC13.3□□□□□ -0.28
ChkaO54804 Gm26315-201ENSMUST00000083890 321 ntBASIC13.3□□□□□ -0.28
ChkaO54804 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
ChkaO54804 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ChkaO54804 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ChkaO54804 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
ChkaO54804 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ChkaO54804 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ChkaO54804 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
ChkaO54804 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC13.3□□□□□ -0.28
ChkaO54804 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ChkaO54804 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ChkaO54804 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ChkaO54804 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ChkaO54804 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ChkaO54804 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
ChkaO54804 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ChkaO54804 AC241621.2-201ENSMUST00000223991 2151 ntBASIC13.3□□□□□ -0.28
ChkaO54804 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
ChkaO54804 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
ChkaO54804 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ChkaO54804 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ChkaO54804 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ChkaO54804 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
ChkaO54804 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ChkaO54804 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ChkaO54804 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ChkaO54804 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
ChkaO54804 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ChkaO54804 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ChkaO54804 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
ChkaO54804 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
ChkaO54804 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ChkaO54804 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ChkaO54804 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ChkaO54804 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ChkaO54804 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ChkaO54804 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ChkaO54804 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ChkaO54804 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC13.29□□□□□ -0.28
ChkaO54804 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
ChkaO54804 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ChkaO54804 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ChkaO54804 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ChkaO54804 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
ChkaO54804 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ChkaO54804 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
ChkaO54804 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ChkaO54804 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
ChkaO54804 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC13.28□□□□□ -0.28
ChkaO54804 Gm9025-201ENSMUST00000122415 1575 ntBASIC13.28□□□□□ -0.28
ChkaO54804 AC113060.1-201ENSMUST00000225689 1573 ntBASIC13.28□□□□□ -0.28
ChkaO54804 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ChkaO54804 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ChkaO54804 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ChkaO54804 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ChkaO54804 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ChkaO54804 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ChkaO54804 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ChkaO54804 Gm37660-201ENSMUST00000192754 1732 ntBASIC13.28□□□□□ -0.28
ChkaO54804 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
ChkaO54804 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
ChkaO54804 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ChkaO54804 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC13.28□□□□□ -0.28
ChkaO54804 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
ChkaO54804 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
ChkaO54804 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ChkaO54804 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
ChkaO54804 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC13.28□□□□□ -0.28
ChkaO54804 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
ChkaO54804 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC13.28□□□□□ -0.28
ChkaO54804 Gm44855-201ENSMUST00000205725 362 ntBASIC13.28□□□□□ -0.28
ChkaO54804 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ChkaO54804 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ChkaO54804 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ChkaO54804 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ChkaO54804 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ChkaO54804 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ChkaO54804 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ChkaO54804 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC13.28□□□□□ -0.28
ChkaO54804 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
ChkaO54804 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
ChkaO54804 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ChkaO54804 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
ChkaO54804 Gm3365-201ENSMUST00000216296 1480 ntBASIC13.28□□□□□ -0.28
ChkaO54804 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ChkaO54804 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ChkaO54804 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC13.28□□□□□ -0.28
ChkaO54804 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ChkaO54804 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC13.28□□□□□ -0.28
ChkaO54804 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ChkaO54804 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ChkaO54804 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms