Protein–RNA interactions for Protein: O35900

Lsm2, U6 snRNA-associated Sm-like protein LSm2, mousemouse

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm2O35900 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Lsm2O35900 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Lsm2O35900 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Lsm2O35900 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Lsm2O35900 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Lsm2O35900 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Lsm2O35900 Gm45684-201ENSMUST00000210244 1571 ntBASIC11.71□□□□□ -0.54
Lsm2O35900 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Lsm2O35900 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Lsm2O35900 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Lsm2O35900 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm2O35900 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm2O35900 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm2O35900 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm2O35900 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm2O35900 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm2O35900 Gm12585-201ENSMUST00000117307 290 ntBASIC11.7□□□□□ -0.54
Lsm2O35900 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm2O35900 Gm14494-201ENSMUST00000118786 435 ntBASIC11.7□□□□□ -0.54
Lsm2O35900 Mir1895-201ENSMUST00000122615 79 ntBASIC11.7□□□□□ -0.54
Lsm2O35900 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm2O35900 Gm27772-201ENSMUST00000184900 187 ntBASIC11.7□□□□□ -0.54
Lsm2O35900 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC11.7□□□□□ -0.54
Lsm2O35900 Gm17870-201ENSMUST00000219489 1174 ntBASIC11.7□□□□□ -0.54
Lsm2O35900 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC11.7□□□□□ -0.54
Lsm2O35900 Gm15500-202ENSMUST00000071641 1019 ntBASIC11.7□□□□□ -0.54
Lsm2O35900 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC11.7□□□□□ -0.54
Lsm2O35900 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm2O35900 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm2O35900 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm2O35900 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Lsm2O35900 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm2O35900 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm2O35900 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm2O35900 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Lsm2O35900 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm2O35900 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm2O35900 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm2O35900 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Lsm2O35900 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm2O35900 AC157950.1-201ENSMUST00000217561 2168 ntBASIC11.69□□□□□ -0.54
Lsm2O35900 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm2O35900 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm2O35900 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm2O35900 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm2O35900 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC11.69□□□□□ -0.54
Lsm2O35900 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm2O35900 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm2O35900 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm2O35900 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Lsm2O35900 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm2O35900 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm2O35900 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm2O35900 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Lsm2O35900 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC11.69□□□□□ -0.54
Lsm2O35900 AC154262.2-202ENSMUST00000225158 1331 ntBASIC11.69□□□□□ -0.54
Lsm2O35900 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm2O35900 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC11.69□□□□□ -0.54
Lsm2O35900 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm2O35900 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Lsm2O35900 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm2O35900 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Lsm2O35900 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm2O35900 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC11.69□□□□□ -0.54
Lsm2O35900 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC11.69□□□□□ -0.54
Lsm2O35900 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC11.69□□□□□ -0.54
Lsm2O35900 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC11.69□□□□□ -0.54
Lsm2O35900 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm2O35900 Gm27533-201ENSMUST00000183800 152 ntBASIC11.69□□□□□ -0.54
Lsm2O35900 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Lsm2O35900 Gm46209-201ENSMUST00000217912 553 ntBASIC11.69□□□□□ -0.54
Lsm2O35900 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm2O35900 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm2O35900 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC11.69□□□□□ -0.54
Lsm2O35900 Paupar-201ENSMUST00000194826 3482 ntBASIC11.69□□□□□ -0.54
Lsm2O35900 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm2O35900 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm2O35900 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm2O35900 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm2O35900 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm2O35900 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm2O35900 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm2O35900 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm2O35900 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm2O35900 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm2O35900 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm2O35900 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm2O35900 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm2O35900 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm2O35900 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm2O35900 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Lsm2O35900 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm2O35900 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm2O35900 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm2O35900 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm2O35900 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm2O35900 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm2O35900 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm2O35900 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm2O35900 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms