Protein–RNA interactions for Protein: O08583

Alyref, THO complex subunit 4, mousemouse

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AlyrefO08583 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
AlyrefO08583 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
AlyrefO08583 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
AlyrefO08583 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
AlyrefO08583 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
AlyrefO08583 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
AlyrefO08583 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
AlyrefO08583 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
AlyrefO08583 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
AlyrefO08583 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
AlyrefO08583 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
AlyrefO08583 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
AlyrefO08583 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
AlyrefO08583 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
AlyrefO08583 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
AlyrefO08583 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC13.35□□□□□ -0.27
AlyrefO08583 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC13.35□□□□□ -0.27
AlyrefO08583 Gm24420-201ENSMUST00000176676 59 ntBASIC13.35□□□□□ -0.27
AlyrefO08583 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC13.35□□□□□ -0.27
AlyrefO08583 Gm18515-201ENSMUST00000219755 797 ntBASIC13.35□□□□□ -0.27
AlyrefO08583 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
AlyrefO08583 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
AlyrefO08583 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
AlyrefO08583 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
AlyrefO08583 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
AlyrefO08583 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
AlyrefO08583 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
AlyrefO08583 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
AlyrefO08583 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
AlyrefO08583 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
AlyrefO08583 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
AlyrefO08583 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
AlyrefO08583 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
AlyrefO08583 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
AlyrefO08583 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
AlyrefO08583 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
AlyrefO08583 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
AlyrefO08583 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
AlyrefO08583 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
AlyrefO08583 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
AlyrefO08583 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC13.34□□□□□ -0.27
AlyrefO08583 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
AlyrefO08583 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
AlyrefO08583 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
AlyrefO08583 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
AlyrefO08583 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
AlyrefO08583 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
AlyrefO08583 Gm6335-201ENSMUST00000118081 1194 ntBASIC13.34□□□□□ -0.27
AlyrefO08583 Gm13408-201ENSMUST00000119822 798 ntBASIC13.34□□□□□ -0.27
AlyrefO08583 Gm7816-201ENSMUST00000119884 1194 ntBASIC13.34□□□□□ -0.27
AlyrefO08583 Gm15542-201ENSMUST00000121585 1194 ntBASIC13.34□□□□□ -0.27
AlyrefO08583 Gm13935-201ENSMUST00000121859 798 ntBASIC13.34□□□□□ -0.27
AlyrefO08583 Gm25545-201ENSMUST00000122673 323 ntBASIC13.34□□□□□ -0.27
AlyrefO08583 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
AlyrefO08583 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC13.34□□□□□ -0.27
AlyrefO08583 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC13.34□□□□□ -0.27
AlyrefO08583 Gm44262-201ENSMUST00000204969 372 ntBASIC13.34□□□□□ -0.27
AlyrefO08583 AC132901.1-201ENSMUST00000224345 508 ntBASIC13.34□□□□□ -0.27
AlyrefO08583 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
AlyrefO08583 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
AlyrefO08583 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13.34□□□□□ -0.27
AlyrefO08583 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
AlyrefO08583 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC13.34□□□□□ -0.27
AlyrefO08583 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
AlyrefO08583 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
AlyrefO08583 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
AlyrefO08583 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
AlyrefO08583 Ssr1-204ENSMUST00000225319 1610 ntBASIC13.34□□□□□ -0.27
AlyrefO08583 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
AlyrefO08583 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
AlyrefO08583 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
AlyrefO08583 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
AlyrefO08583 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
AlyrefO08583 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
AlyrefO08583 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
AlyrefO08583 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
AlyrefO08583 Gm2420-202ENSMUST00000202224 2249 ntBASIC13.33□□□□□ -0.27
AlyrefO08583 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
AlyrefO08583 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
AlyrefO08583 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
AlyrefO08583 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
AlyrefO08583 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
AlyrefO08583 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
AlyrefO08583 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
AlyrefO08583 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
AlyrefO08583 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
AlyrefO08583 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
AlyrefO08583 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
AlyrefO08583 Gm15957-201ENSMUST00000118893 974 ntBASIC13.33□□□□□ -0.28
AlyrefO08583 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC13.33□□□□□ -0.28
AlyrefO08583 Gm13665-201ENSMUST00000120830 528 ntBASIC13.33□□□□□ -0.28
AlyrefO08583 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
AlyrefO08583 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
AlyrefO08583 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
AlyrefO08583 Gm26361-201ENSMUST00000158868 186 ntBASIC13.33□□□□□ -0.28
AlyrefO08583 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
AlyrefO08583 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
AlyrefO08583 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC13.33□□□□□ -0.28
AlyrefO08583 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC13.33□□□□□ -0.28
AlyrefO08583 Gm9726-201ENSMUST00000180321 678 ntBASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 70.1 ms