Protein–RNA interactions for Protein: J3QPF1

Gm10553, Predicted gene 10553, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10553J3QPF1 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Gm10553J3QPF1 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC10.06□□□□□ -0.8
Gm10553J3QPF1 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC10.06□□□□□ -0.8
Gm10553J3QPF1 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Gm10553J3QPF1 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Gm10553J3QPF1 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Gm10553J3QPF1 AC096628.2-201ENSMUST00000225443 1413 ntBASIC10.06□□□□□ -0.8
Gm10553J3QPF1 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Gm10553J3QPF1 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Gm10553J3QPF1 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Gm10553J3QPF1 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Gm10553J3QPF1 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Gm10553J3QPF1 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Gm10553J3QPF1 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Gm10553J3QPF1 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Gm10553J3QPF1 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Gm10553J3QPF1 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Gm10553J3QPF1 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Gm10553J3QPF1 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Gm10553J3QPF1 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Gm10553J3QPF1 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Gm10553J3QPF1 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC10.05□□□□□ -0.8
Gm10553J3QPF1 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Gm10553J3QPF1 Gm16202-201ENSMUST00000117532 544 ntBASIC10.05□□□□□ -0.8
Gm10553J3QPF1 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Gm10553J3QPF1 Gm24196-201ENSMUST00000179161 110 ntBASIC10.05□□□□□ -0.8
Gm10553J3QPF1 Gm29649-201ENSMUST00000185649 419 ntBASIC10.05□□□□□ -0.8
Gm10553J3QPF1 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC10.05□□□□□ -0.8
Gm10553J3QPF1 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Gm10553J3QPF1 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
Gm10553J3QPF1 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC10.05□□□□□ -0.8
Gm10553J3QPF1 AC154595.3-201ENSMUST00000224579 384 ntBASIC10.05□□□□□ -0.8
Gm10553J3QPF1 CT573086.1-201ENSMUST00000227202 1074 ntBASIC10.05□□□□□ -0.8
Gm10553J3QPF1 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Gm10553J3QPF1 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Gm10553J3QPF1 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Gm10553J3QPF1 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Gm10553J3QPF1 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Gm10553J3QPF1 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Gm10553J3QPF1 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC10.05□□□□□ -0.8
Gm10553J3QPF1 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Gm10553J3QPF1 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Gm10553J3QPF1 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Gm10553J3QPF1 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Gm10553J3QPF1 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Gm10553J3QPF1 AC114008.2-201ENSMUST00000227699 1347 ntBASIC10.05□□□□□ -0.8
Gm10553J3QPF1 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC10.05□□□□□ -0.8
Gm10553J3QPF1 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Gm10553J3QPF1 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Gm10553J3QPF1 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC10.05□□□□□ -0.8
Gm10553J3QPF1 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Gm10553J3QPF1 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Gm10553J3QPF1 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Gm10553J3QPF1 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Gm10553J3QPF1 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC10.04□□□□□ -0.8
Gm10553J3QPF1 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Gm10553J3QPF1 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Gm10553J3QPF1 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Gm10553J3QPF1 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Gm10553J3QPF1 Gm37324-201ENSMUST00000194500 4504 ntBASIC10.04□□□□□ -0.8
Gm10553J3QPF1 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Gm10553J3QPF1 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Gm10553J3QPF1 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Gm10553J3QPF1 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Gm10553J3QPF1 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Gm10553J3QPF1 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Gm10553J3QPF1 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC10.04□□□□□ -0.8
Gm10553J3QPF1 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Gm10553J3QPF1 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Gm10553J3QPF1 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Gm10553J3QPF1 Gm12203-201ENSMUST00000118235 598 ntBASIC10.04□□□□□ -0.8
Gm10553J3QPF1 Gm13369-201ENSMUST00000119442 987 ntBASIC10.04□□□□□ -0.8
Gm10553J3QPF1 Gm11425-201ENSMUST00000119608 498 ntBASIC10.04□□□□□ -0.8
Gm10553J3QPF1 Gm12209-201ENSMUST00000120089 596 ntBASIC10.04□□□□□ -0.8
Gm10553J3QPF1 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Gm10553J3QPF1 Gm24644-201ENSMUST00000157114 139 ntBASIC10.04□□□□□ -0.8
Gm10553J3QPF1 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC10.04□□□□□ -0.8
Gm10553J3QPF1 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Gm10553J3QPF1 Gm8835-201ENSMUST00000173096 1169 ntBASIC10.04□□□□□ -0.8
Gm10553J3QPF1 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Gm10553J3QPF1 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC10.04□□□□□ -0.8
Gm10553J3QPF1 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC10.04□□□□□ -0.8
Gm10553J3QPF1 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC10.04□□□□□ -0.8
Gm10553J3QPF1 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Gm10553J3QPF1 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC10.04□□□□□ -0.8
Gm10553J3QPF1 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Gm10553J3QPF1 Gm9396-201ENSMUST00000076703 567 ntBASIC10.04□□□□□ -0.8
Gm10553J3QPF1 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Gm10553J3QPF1 AC122314.1-201ENSMUST00000223056 2239 ntBASIC10.04□□□□□ -0.8
Gm10553J3QPF1 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Gm10553J3QPF1 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Gm10553J3QPF1 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC10.04□□□□□ -0.8
Gm10553J3QPF1 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Gm10553J3QPF1 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Gm10553J3QPF1 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Gm10553J3QPF1 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Gm10553J3QPF1 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Gm10553J3QPF1 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Gm10553J3QPF1 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Gm10553J3QPF1 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 66.4 ms