Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh9F8VPK8 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh9F8VPK8 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Pcdh9F8VPK8 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh9F8VPK8 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh9F8VPK8 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh9F8VPK8 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Pcdh9F8VPK8 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh9F8VPK8 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh9F8VPK8 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh9F8VPK8 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh9F8VPK8 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdh9F8VPK8 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdh9F8VPK8 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdh9F8VPK8 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdh9F8VPK8 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdh9F8VPK8 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdh9F8VPK8 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
Pcdh9F8VPK8 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Pcdh9F8VPK8 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdh9F8VPK8 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdh9F8VPK8 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdh9F8VPK8 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC13.48□□□□□ -0.25
Pcdh9F8VPK8 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC13.48□□□□□ -0.25
Pcdh9F8VPK8 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdh9F8VPK8 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdh9F8VPK8 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Pcdh9F8VPK8 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
Pcdh9F8VPK8 Gm5354-201ENSMUST00000182417 973 ntBASIC13.48□□□□□ -0.25
Pcdh9F8VPK8 Gm27437-201ENSMUST00000183429 107 ntBASIC13.48□□□□□ -0.25
Pcdh9F8VPK8 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdh9F8VPK8 Gm5626-201ENSMUST00000222151 1058 ntBASIC13.48□□□□□ -0.25
Pcdh9F8VPK8 AC192088.1-201ENSMUST00000227561 301 ntBASIC13.48□□□□□ -0.25
Pcdh9F8VPK8 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdh9F8VPK8 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Pcdh9F8VPK8 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdh9F8VPK8 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdh9F8VPK8 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Pcdh9F8VPK8 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Pcdh9F8VPK8 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdh9F8VPK8 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdh9F8VPK8 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Pcdh9F8VPK8 Gm28323-201ENSMUST00000186817 2499 ntBASIC13.48□□□□□ -0.25
Pcdh9F8VPK8 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC13.48□□□□□ -0.25
Pcdh9F8VPK8 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Pcdh9F8VPK8 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdh9F8VPK8 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC13.48□□□□□ -0.25
Pcdh9F8VPK8 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdh9F8VPK8 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh9F8VPK8 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh9F8VPK8 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh9F8VPK8 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh9F8VPK8 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh9F8VPK8 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC13.47□□□□□ -0.25
Pcdh9F8VPK8 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh9F8VPK8 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh9F8VPK8 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC13.47□□□□□ -0.25
Pcdh9F8VPK8 Gm12416-201ENSMUST00000120911 1008 ntBASIC13.47□□□□□ -0.25
Pcdh9F8VPK8 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC13.47□□□□□ -0.25
Pcdh9F8VPK8 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC13.47□□□□□ -0.25
Pcdh9F8VPK8 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC13.47□□□□□ -0.25
Pcdh9F8VPK8 AC138604.1-201ENSMUST00000226969 739 ntBASIC13.47□□□□□ -0.25
Pcdh9F8VPK8 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh9F8VPK8 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh9F8VPK8 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh9F8VPK8 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh9F8VPK8 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh9F8VPK8 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Pcdh9F8VPK8 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh9F8VPK8 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh9F8VPK8 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh9F8VPK8 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Pcdh9F8VPK8 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh9F8VPK8 Ldb3-207ENSMUST00000227819 1499 ntBASIC13.47□□□□□ -0.25
Pcdh9F8VPK8 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh9F8VPK8 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh9F8VPK8 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC13.47□□□□□ -0.25
Pcdh9F8VPK8 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh9F8VPK8 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh9F8VPK8 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh9F8VPK8 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh9F8VPK8 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh9F8VPK8 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC13.46□□□□□ -0.25
Pcdh9F8VPK8 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdh9F8VPK8 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdh9F8VPK8 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdh9F8VPK8 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdh9F8VPK8 Gm9755-201ENSMUST00000032981 1356 ntBASIC13.46□□□□□ -0.25
Pcdh9F8VPK8 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdh9F8VPK8 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdh9F8VPK8 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Pcdh9F8VPK8 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdh9F8VPK8 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdh9F8VPK8 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Pcdh9F8VPK8 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC13.46□□□□□ -0.25
Pcdh9F8VPK8 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
Pcdh9F8VPK8 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdh9F8VPK8 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdh9F8VPK8 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdh9F8VPK8 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms