Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Gm29340-201ENSMUST00000188763 3854 ntBASIC13.16□□□□□ -0.3
Ccdc188F6WEU2 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc188F6WEU2 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc188F6WEU2 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc188F6WEU2 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc188F6WEU2 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC13.16□□□□□ -0.3
Ccdc188F6WEU2 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc188F6WEU2 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc188F6WEU2 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc188F6WEU2 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc188F6WEU2 Gm11451-201ENSMUST00000118946 630 ntBASIC13.16□□□□□ -0.3
Ccdc188F6WEU2 Gm14999-201ENSMUST00000121039 624 ntBASIC13.16□□□□□ -0.3
Ccdc188F6WEU2 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc188F6WEU2 Gm4862-201ENSMUST00000170405 438 ntBASIC13.16□□□□□ -0.3
Ccdc188F6WEU2 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC13.16□□□□□ -0.3
Ccdc188F6WEU2 Gm5852-201ENSMUST00000194119 1021 ntBASIC13.16□□□□□ -0.3
Ccdc188F6WEU2 Gm5542-201ENSMUST00000195485 1089 ntBASIC13.16□□□□□ -0.3
Ccdc188F6WEU2 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC13.16□□□□□ -0.3
Ccdc188F6WEU2 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc188F6WEU2 Arhgef33-210ENSMUST00000225548 456 ntBASIC13.16□□□□□ -0.3
Ccdc188F6WEU2 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc188F6WEU2 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc188F6WEU2 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc188F6WEU2 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc188F6WEU2 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc188F6WEU2 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc188F6WEU2 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc188F6WEU2 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc188F6WEU2 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc188F6WEU2 AC133083.1-201ENSMUST00000221736 2209 ntBASIC13.16□□□□□ -0.3
Ccdc188F6WEU2 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc188F6WEU2 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc188F6WEU2 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc188F6WEU2 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc188F6WEU2 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc188F6WEU2 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc188F6WEU2 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc188F6WEU2 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc188F6WEU2 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc188F6WEU2 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc188F6WEU2 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc188F6WEU2 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc188F6WEU2 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC13.15□□□□□ -0.3
Ccdc188F6WEU2 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc188F6WEU2 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc188F6WEU2 Gm15036-201ENSMUST00000118880 400 ntBASIC13.15□□□□□ -0.3
Ccdc188F6WEU2 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc188F6WEU2 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
Ccdc188F6WEU2 Gm25881-201ENSMUST00000157783 103 ntBASIC13.15□□□□□ -0.3
Ccdc188F6WEU2 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC13.15□□□□□ -0.3
Ccdc188F6WEU2 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Ccdc188F6WEU2 Gm28388-201ENSMUST00000186262 437 ntBASIC13.15□□□□□ -0.3
Ccdc188F6WEU2 Gm44329-201ENSMUST00000197469 112 ntBASIC13.15□□□□□ -0.3
Ccdc188F6WEU2 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc188F6WEU2 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC13.15□□□□□ -0.3
Ccdc188F6WEU2 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc188F6WEU2 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc188F6WEU2 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Ccdc188F6WEU2 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc188F6WEU2 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc188F6WEU2 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Ccdc188F6WEU2 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc188F6WEU2 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc188F6WEU2 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Ccdc188F6WEU2 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc188F6WEU2 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc188F6WEU2 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Ccdc188F6WEU2 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Ccdc188F6WEU2 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Ccdc188F6WEU2 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc188F6WEU2 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc188F6WEU2 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc188F6WEU2 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc188F6WEU2 Gm7278-201ENSMUST00000119836 1401 ntBASIC13.14□□□□□ -0.31
Ccdc188F6WEU2 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc188F6WEU2 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc188F6WEU2 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Ccdc188F6WEU2 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc188F6WEU2 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc188F6WEU2 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC13.14□□□□□ -0.31
Ccdc188F6WEU2 1700001C02Rik-202ENSMUST00000114743 729 ntTSL 5 BASIC13.14□□□□□ -0.31
Ccdc188F6WEU2 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC13.14□□□□□ -0.31
Ccdc188F6WEU2 Gm5257-201ENSMUST00000121823 790 ntBASIC13.14□□□□□ -0.31
Ccdc188F6WEU2 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc188F6WEU2 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC13.14□□□□□ -0.31
Ccdc188F6WEU2 Gm23771-201ENSMUST00000178702 110 ntBASIC13.14□□□□□ -0.31
Ccdc188F6WEU2 Gm27910-201ENSMUST00000185004 107 ntBASIC13.14□□□□□ -0.31
Ccdc188F6WEU2 Gm42518-201ENSMUST00000196277 938 ntBASIC13.14□□□□□ -0.31
Ccdc188F6WEU2 Gm18204-201ENSMUST00000209835 793 ntBASIC13.14□□□□□ -0.31
Ccdc188F6WEU2 Gm35713-201ENSMUST00000210516 199 ntBASIC13.14□□□□□ -0.31
Ccdc188F6WEU2 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc188F6WEU2 AC108416.1-202ENSMUST00000228927 1201 ntBASIC13.14□□□□□ -0.31
Ccdc188F6WEU2 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc188F6WEU2 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc188F6WEU2 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Ccdc188F6WEU2 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc188F6WEU2 n-R5s211-201ENSMUST00000093689 119 ntBASIC13.14□□□□□ -0.31
Ccdc188F6WEU2 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc188F6WEU2 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc188F6WEU2 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms