Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Gm31256-201ENSMUST00000194705 506 ntBASIC15.72■□□□□ 0.11
Ube4aE9Q735 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ube4aE9Q735 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ube4aE9Q735 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ube4aE9Q735 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC15.72■□□□□ 0.11
Ube4aE9Q735 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Ube4aE9Q735 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ube4aE9Q735 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ube4aE9Q735 Gm7993-201ENSMUST00000200970 1384 ntBASIC15.72■□□□□ 0.11
Ube4aE9Q735 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC15.72■□□□□ 0.11
Ube4aE9Q735 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ube4aE9Q735 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC15.72■□□□□ 0.11
Ube4aE9Q735 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ube4aE9Q735 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ube4aE9Q735 Gm19221-201ENSMUST00000221827 1477 ntBASIC15.71■□□□□ 0.11
Ube4aE9Q735 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ube4aE9Q735 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ube4aE9Q735 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ube4aE9Q735 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC15.71■□□□□ 0.11
Ube4aE9Q735 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC15.71■□□□□ 0.11
Ube4aE9Q735 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ube4aE9Q735 Gm9025-201ENSMUST00000122415 1575 ntBASIC15.71■□□□□ 0.11
Ube4aE9Q735 AC113060.1-201ENSMUST00000225689 1573 ntBASIC15.71■□□□□ 0.11
Ube4aE9Q735 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ube4aE9Q735 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ube4aE9Q735 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ube4aE9Q735 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC15.71■□□□□ 0.11
Ube4aE9Q735 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ube4aE9Q735 Gm14921-201ENSMUST00000118643 908 ntBASIC15.71■□□□□ 0.11
Ube4aE9Q735 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
Ube4aE9Q735 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Ube4aE9Q735 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ube4aE9Q735 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ube4aE9Q735 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ube4aE9Q735 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC15.71■□□□□ 0.11
Ube4aE9Q735 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC15.71■□□□□ 0.11
Ube4aE9Q735 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC15.71■□□□□ 0.11
Ube4aE9Q735 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC15.71■□□□□ 0.11
Ube4aE9Q735 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ube4aE9Q735 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ube4aE9Q735 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ube4aE9Q735 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ube4aE9Q735 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ube4aE9Q735 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ube4aE9Q735 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ube4aE9Q735 Gm6992-201ENSMUST00000217973 1607 ntBASIC15.71■□□□□ 0.11
Ube4aE9Q735 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ube4aE9Q735 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ube4aE9Q735 Gm45779-201ENSMUST00000212189 4064 ntBASIC15.71■□□□□ 0.1
Ube4aE9Q735 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.1
Ube4aE9Q735 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Ube4aE9Q735 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ube4aE9Q735 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Ube4aE9Q735 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ube4aE9Q735 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC15.7■□□□□ 0.1
Ube4aE9Q735 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ube4aE9Q735 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ube4aE9Q735 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ube4aE9Q735 Gm42769-201ENSMUST00000198576 1659 ntBASIC15.7■□□□□ 0.1
Ube4aE9Q735 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ube4aE9Q735 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ube4aE9Q735 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ube4aE9Q735 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ube4aE9Q735 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ube4aE9Q735 Gm37737-201ENSMUST00000195013 1638 ntBASIC15.7■□□□□ 0.1
Ube4aE9Q735 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ube4aE9Q735 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ube4aE9Q735 Gm25214-201ENSMUST00000104573 129 ntBASIC15.7■□□□□ 0.1
Ube4aE9Q735 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ube4aE9Q735 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC15.7■□□□□ 0.1
Ube4aE9Q735 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Ube4aE9Q735 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ube4aE9Q735 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC15.7■□□□□ 0.1
Ube4aE9Q735 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Ube4aE9Q735 Gm37466-201ENSMUST00000195692 652 ntBASIC15.7■□□□□ 0.1
Ube4aE9Q735 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
Ube4aE9Q735 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC15.7■□□□□ 0.1
Ube4aE9Q735 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ube4aE9Q735 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Ube4aE9Q735 Gm22058-201ENSMUST00000083393 310 ntBASIC15.7■□□□□ 0.1
Ube4aE9Q735 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ube4aE9Q735 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC15.7■□□□□ 0.1
Ube4aE9Q735 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Ube4aE9Q735 Mir433-201ENSMUST00000093564 124 ntBASIC15.7■□□□□ 0.1
Ube4aE9Q735 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Ube4aE9Q735 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ube4aE9Q735 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ube4aE9Q735 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ube4aE9Q735 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
Ube4aE9Q735 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Ube4aE9Q735 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ube4aE9Q735 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ube4aE9Q735 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ube4aE9Q735 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ube4aE9Q735 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ube4aE9Q735 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ube4aE9Q735 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ube4aE9Q735 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ube4aE9Q735 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ube4aE9Q735 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms