Protein–RNA interactions for Protein: E9PUL3

Clca3b, Chloride channel accessory 3B, mousemouse

Predictions only

Length 1,044 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clca3bE9PUL3 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clca3bE9PUL3 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clca3bE9PUL3 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clca3bE9PUL3 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clca3bE9PUL3 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clca3bE9PUL3 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clca3bE9PUL3 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Clca3bE9PUL3 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clca3bE9PUL3 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clca3bE9PUL3 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Clca3bE9PUL3 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clca3bE9PUL3 Gm44065-201ENSMUST00000203184 3527 ntBASIC14.14□□□□□ -0.15
Clca3bE9PUL3 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clca3bE9PUL3 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clca3bE9PUL3 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clca3bE9PUL3 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clca3bE9PUL3 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Clca3bE9PUL3 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clca3bE9PUL3 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clca3bE9PUL3 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Clca3bE9PUL3 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clca3bE9PUL3 Gm6198-201ENSMUST00000191337 2929 ntBASIC14.13□□□□□ -0.15
Clca3bE9PUL3 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clca3bE9PUL3 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Clca3bE9PUL3 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Clca3bE9PUL3 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Clca3bE9PUL3 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Clca3bE9PUL3 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Clca3bE9PUL3 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Clca3bE9PUL3 Gm12742-201ENSMUST00000117326 410 ntBASIC14.13□□□□□ -0.15
Clca3bE9PUL3 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clca3bE9PUL3 Gm26185-201ENSMUST00000157692 266 ntBASIC14.13□□□□□ -0.15
Clca3bE9PUL3 Gm25927-201ENSMUST00000175058 117 ntBASIC14.13□□□□□ -0.15
Clca3bE9PUL3 Gm4768-201ENSMUST00000206199 686 ntBASIC14.13□□□□□ -0.15
Clca3bE9PUL3 Gm32025-201ENSMUST00000217960 307 ntBASIC14.13□□□□□ -0.15
Clca3bE9PUL3 Gm19309-201ENSMUST00000218295 205 ntBASIC14.13□□□□□ -0.15
Clca3bE9PUL3 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC14.13□□□□□ -0.15
Clca3bE9PUL3 AC022775.2-201ENSMUST00000227885 646 ntBASIC14.13□□□□□ -0.15
Clca3bE9PUL3 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clca3bE9PUL3 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC14.13□□□□□ -0.15
Clca3bE9PUL3 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Clca3bE9PUL3 Gm38346-201ENSMUST00000192379 2639 ntBASIC14.13□□□□□ -0.15
Clca3bE9PUL3 CT025610.1-201ENSMUST00000224552 1786 ntBASIC14.13□□□□□ -0.15
Clca3bE9PUL3 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clca3bE9PUL3 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Clca3bE9PUL3 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC14.13□□□□□ -0.15
Clca3bE9PUL3 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Clca3bE9PUL3 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clca3bE9PUL3 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clca3bE9PUL3 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clca3bE9PUL3 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Clca3bE9PUL3 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clca3bE9PUL3 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clca3bE9PUL3 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Clca3bE9PUL3 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Clca3bE9PUL3 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Clca3bE9PUL3 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clca3bE9PUL3 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Clca3bE9PUL3 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clca3bE9PUL3 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Clca3bE9PUL3 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Clca3bE9PUL3 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC14.12□□□□□ -0.15
Clca3bE9PUL3 Gm12846-201ENSMUST00000120431 1373 ntBASIC14.12□□□□□ -0.15
Clca3bE9PUL3 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clca3bE9PUL3 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Clca3bE9PUL3 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC14.12□□□□□ -0.15
Clca3bE9PUL3 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Clca3bE9PUL3 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clca3bE9PUL3 Gm5939-201ENSMUST00000119613 2874 ntBASIC14.12□□□□□ -0.15
Clca3bE9PUL3 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clca3bE9PUL3 Gm8798-201ENSMUST00000211877 1661 ntBASIC14.12□□□□□ -0.15
Clca3bE9PUL3 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clca3bE9PUL3 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC14.12□□□□□ -0.15
Clca3bE9PUL3 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Clca3bE9PUL3 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC14.12□□□□□ -0.15
Clca3bE9PUL3 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clca3bE9PUL3 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clca3bE9PUL3 Gm22121-201ENSMUST00000175148 54 ntBASIC14.12□□□□□ -0.15
Clca3bE9PUL3 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Clca3bE9PUL3 Gm9061-201ENSMUST00000182707 1006 ntBASIC14.12□□□□□ -0.15
Clca3bE9PUL3 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clca3bE9PUL3 Gm5370-201ENSMUST00000187187 574 ntBASIC14.12□□□□□ -0.15
Clca3bE9PUL3 Gm43438-201ENSMUST00000198133 379 ntBASIC14.12□□□□□ -0.15
Clca3bE9PUL3 Gm17823-201ENSMUST00000217830 1006 ntBASIC14.12□□□□□ -0.15
Clca3bE9PUL3 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC14.12□□□□□ -0.15
Clca3bE9PUL3 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Clca3bE9PUL3 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clca3bE9PUL3 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clca3bE9PUL3 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clca3bE9PUL3 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clca3bE9PUL3 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clca3bE9PUL3 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clca3bE9PUL3 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clca3bE9PUL3 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC14.12□□□□□ -0.15
Clca3bE9PUL3 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Clca3bE9PUL3 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Clca3bE9PUL3 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clca3bE9PUL3 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Clca3bE9PUL3 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC14.12□□□□□ -0.15
Clca3bE9PUL3 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 71.8 ms