Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hfm1D3Z4R1 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hfm1D3Z4R1 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hfm1D3Z4R1 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hfm1D3Z4R1 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Hfm1D3Z4R1 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hfm1D3Z4R1 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hfm1D3Z4R1 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hfm1D3Z4R1 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Hfm1D3Z4R1 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Hfm1D3Z4R1 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hfm1D3Z4R1 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hfm1D3Z4R1 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Hfm1D3Z4R1 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hfm1D3Z4R1 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hfm1D3Z4R1 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hfm1D3Z4R1 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hfm1D3Z4R1 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Hfm1D3Z4R1 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hfm1D3Z4R1 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC18.14■□□□□ 0.49
Hfm1D3Z4R1 Gm9025-201ENSMUST00000122415 1575 ntBASIC18.14■□□□□ 0.49
Hfm1D3Z4R1 AC113060.1-201ENSMUST00000225689 1573 ntBASIC18.14■□□□□ 0.49
Hfm1D3Z4R1 Gm12165-201ENSMUST00000117047 342 ntBASIC18.14■□□□□ 0.49
Hfm1D3Z4R1 Selenot-ps-201ENSMUST00000119098 593 ntBASIC18.14■□□□□ 0.49
Hfm1D3Z4R1 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC18.14■□□□□ 0.49
Hfm1D3Z4R1 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC18.14■□□□□ 0.49
Hfm1D3Z4R1 Gm17391-201ENSMUST00000171036 126 ntBASIC18.14■□□□□ 0.49
Hfm1D3Z4R1 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC18.14■□□□□ 0.49
Hfm1D3Z4R1 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Hfm1D3Z4R1 Gm43916-201ENSMUST00000205062 967 ntBASIC18.14■□□□□ 0.49
Hfm1D3Z4R1 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hfm1D3Z4R1 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hfm1D3Z4R1 Gm10076-201ENSMUST00000073238 384 ntBASIC18.14■□□□□ 0.49
Hfm1D3Z4R1 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hfm1D3Z4R1 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hfm1D3Z4R1 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hfm1D3Z4R1 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hfm1D3Z4R1 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Hfm1D3Z4R1 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hfm1D3Z4R1 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hfm1D3Z4R1 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hfm1D3Z4R1 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hfm1D3Z4R1 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hfm1D3Z4R1 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hfm1D3Z4R1 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hfm1D3Z4R1 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hfm1D3Z4R1 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Hfm1D3Z4R1 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC18.13■□□□□ 0.49
Hfm1D3Z4R1 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hfm1D3Z4R1 Gm4993-201ENSMUST00000118719 1174 ntBASIC18.13■□□□□ 0.49
Hfm1D3Z4R1 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Hfm1D3Z4R1 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC18.13■□□□□ 0.49
Hfm1D3Z4R1 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Hfm1D3Z4R1 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Hfm1D3Z4R1 Gm8194-201ENSMUST00000159783 859 ntBASIC18.13■□□□□ 0.49
Hfm1D3Z4R1 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Hfm1D3Z4R1 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hfm1D3Z4R1 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Hfm1D3Z4R1 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hfm1D3Z4R1 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hfm1D3Z4R1 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hfm1D3Z4R1 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Hfm1D3Z4R1 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hfm1D3Z4R1 Gm13812-201ENSMUST00000118061 1347 ntBASIC18.12■□□□□ 0.49
Hfm1D3Z4R1 Gm13810-201ENSMUST00000118584 1347 ntBASIC18.12■□□□□ 0.49
Hfm1D3Z4R1 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hfm1D3Z4R1 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hfm1D3Z4R1 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hfm1D3Z4R1 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hfm1D3Z4R1 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hfm1D3Z4R1 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Hfm1D3Z4R1 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hfm1D3Z4R1 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hfm1D3Z4R1 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Hfm1D3Z4R1 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
Hfm1D3Z4R1 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hfm1D3Z4R1 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hfm1D3Z4R1 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC18.12■□□□□ 0.49
Hfm1D3Z4R1 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC18.12■□□□□ 0.49
Hfm1D3Z4R1 Mir6546-201ENSMUST00000184460 62 ntBASIC18.12■□□□□ 0.49
Hfm1D3Z4R1 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hfm1D3Z4R1 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hfm1D3Z4R1 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hfm1D3Z4R1 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hfm1D3Z4R1 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hfm1D3Z4R1 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Hfm1D3Z4R1 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Hfm1D3Z4R1 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hfm1D3Z4R1 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hfm1D3Z4R1 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hfm1D3Z4R1 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hfm1D3Z4R1 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hfm1D3Z4R1 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hfm1D3Z4R1 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hfm1D3Z4R1 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hfm1D3Z4R1 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hfm1D3Z4R1 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
Hfm1D3Z4R1 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Hfm1D3Z4R1 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Hfm1D3Z4R1 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms