Protein–RNA interactions for Protein: B2KF05

Brpf3, Bromodomain and PHD finger-containing, 3, mousemouse

Known RBP Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brpf3B2KF05 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Brpf3B2KF05 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Brpf3B2KF05 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Brpf3B2KF05 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Brpf3B2KF05 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Brpf3B2KF05 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Brpf3B2KF05 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Brpf3B2KF05 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Brpf3B2KF05 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Brpf3B2KF05 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC14.59□□□□□ -0.07
Brpf3B2KF05 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Brpf3B2KF05 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Brpf3B2KF05 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Brpf3B2KF05 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Brpf3B2KF05 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Brpf3B2KF05 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC14.59□□□□□ -0.07
Brpf3B2KF05 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC14.59□□□□□ -0.07
Brpf3B2KF05 Gm12585-201ENSMUST00000117307 290 ntBASIC14.59□□□□□ -0.07
Brpf3B2KF05 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC14.59□□□□□ -0.07
Brpf3B2KF05 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC14.59□□□□□ -0.07
Brpf3B2KF05 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Brpf3B2KF05 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC14.59□□□□□ -0.07
Brpf3B2KF05 Gm27622-201ENSMUST00000183779 60 ntBASIC14.59□□□□□ -0.07
Brpf3B2KF05 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC14.59□□□□□ -0.07
Brpf3B2KF05 Gm17870-201ENSMUST00000219489 1174 ntBASIC14.59□□□□□ -0.07
Brpf3B2KF05 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Brpf3B2KF05 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Brpf3B2KF05 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Brpf3B2KF05 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Brpf3B2KF05 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Brpf3B2KF05 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC14.59□□□□□ -0.07
Brpf3B2KF05 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Brpf3B2KF05 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Brpf3B2KF05 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Brpf3B2KF05 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Brpf3B2KF05 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Brpf3B2KF05 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Brpf3B2KF05 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Brpf3B2KF05 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Brpf3B2KF05 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Brpf3B2KF05 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Brpf3B2KF05 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Brpf3B2KF05 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Brpf3B2KF05 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC14.58□□□□□ -0.07
Brpf3B2KF05 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
Brpf3B2KF05 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Brpf3B2KF05 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Brpf3B2KF05 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Brpf3B2KF05 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC14.58□□□□□ -0.07
Brpf3B2KF05 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Brpf3B2KF05 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Brpf3B2KF05 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Brpf3B2KF05 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Brpf3B2KF05 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Brpf3B2KF05 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Brpf3B2KF05 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Brpf3B2KF05 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC14.58□□□□□ -0.08
Brpf3B2KF05 Gm24158-201ENSMUST00000175263 71 ntBASIC14.58□□□□□ -0.08
Brpf3B2KF05 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Brpf3B2KF05 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC14.58□□□□□ -0.08
Brpf3B2KF05 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC14.58□□□□□ -0.08
Brpf3B2KF05 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Brpf3B2KF05 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Brpf3B2KF05 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Brpf3B2KF05 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Brpf3B2KF05 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Brpf3B2KF05 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Brpf3B2KF05 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Brpf3B2KF05 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Brpf3B2KF05 Gm36970-201ENSMUST00000193688 1859 ntBASIC14.58□□□□□ -0.08
Brpf3B2KF05 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Brpf3B2KF05 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC14.58□□□□□ -0.08
Brpf3B2KF05 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Brpf3B2KF05 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Brpf3B2KF05 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Brpf3B2KF05 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Brpf3B2KF05 Gm13517-201ENSMUST00000120782 1495 ntBASIC14.57□□□□□ -0.08
Brpf3B2KF05 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
Brpf3B2KF05 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Brpf3B2KF05 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Brpf3B2KF05 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Brpf3B2KF05 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Brpf3B2KF05 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Brpf3B2KF05 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Brpf3B2KF05 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Brpf3B2KF05 Gm15693-201ENSMUST00000120470 637 ntBASIC14.57□□□□□ -0.08
Brpf3B2KF05 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC14.57□□□□□ -0.08
Brpf3B2KF05 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Brpf3B2KF05 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC14.57□□□□□ -0.08
Brpf3B2KF05 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Brpf3B2KF05 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Brpf3B2KF05 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14.57□□□□□ -0.08
Brpf3B2KF05 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Brpf3B2KF05 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Brpf3B2KF05 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Brpf3B2KF05 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Brpf3B2KF05 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Brpf3B2KF05 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Brpf3B2KF05 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Brpf3B2KF05 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 69.1 ms