Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Gm12887B1AVM1 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Gm12887B1AVM1 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Gm12887B1AVM1 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Gm12887B1AVM1 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Gm12887B1AVM1 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Gm12887B1AVM1 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Gm12887B1AVM1 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Gm12887B1AVM1 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Gm12887B1AVM1 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Gm12887B1AVM1 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Gm12887B1AVM1 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC10.62□□□□□ -0.71
Gm12887B1AVM1 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Gm12887B1AVM1 Gm11745-201ENSMUST00000121669 448 ntBASIC10.62□□□□□ -0.71
Gm12887B1AVM1 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Gm12887B1AVM1 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC10.62□□□□□ -0.71
Gm12887B1AVM1 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
Gm12887B1AVM1 Rprl2-201ENSMUST00000157150 290 ntBASIC10.62□□□□□ -0.71
Gm12887B1AVM1 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Gm12887B1AVM1 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Gm12887B1AVM1 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Gm12887B1AVM1 Mir8117-201ENSMUST00000184773 107 ntBASIC10.62□□□□□ -0.71
Gm12887B1AVM1 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC10.62□□□□□ -0.71
Gm12887B1AVM1 Gm19931-201ENSMUST00000198920 368 ntBASIC10.62□□□□□ -0.71
Gm12887B1AVM1 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC10.62□□□□□ -0.71
Gm12887B1AVM1 AC164629.2-201ENSMUST00000217916 270 ntBASIC10.62□□□□□ -0.71
Gm12887B1AVM1 Gm16476-201ENSMUST00000221544 139 ntBASIC10.62□□□□□ -0.71
Gm12887B1AVM1 Gm5628-201ENSMUST00000222318 1049 ntBASIC10.62□□□□□ -0.71
Gm12887B1AVM1 AC090659.2-201ENSMUST00000225378 1186 ntBASIC10.62□□□□□ -0.71
Gm12887B1AVM1 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Gm12887B1AVM1 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Gm12887B1AVM1 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Gm12887B1AVM1 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Gm12887B1AVM1 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Gm12887B1AVM1 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Gm12887B1AVM1 Gm8798-201ENSMUST00000211877 1661 ntBASIC10.62□□□□□ -0.71
Gm12887B1AVM1 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Gm12887B1AVM1 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Gm12887B1AVM1 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Gm12887B1AVM1 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Gm12887B1AVM1 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Gm12887B1AVM1 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC10.62□□□□□ -0.71
Gm12887B1AVM1 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Gm12887B1AVM1 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Gm12887B1AVM1 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Gm12887B1AVM1 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Gm12887B1AVM1 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Gm12887B1AVM1 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Gm12887B1AVM1 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Gm12887B1AVM1 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Gm12887B1AVM1 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Gm12887B1AVM1 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Gm12887B1AVM1 Gm44292-201ENSMUST00000205194 2364 ntBASIC10.61□□□□□ -0.71
Gm12887B1AVM1 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Gm12887B1AVM1 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Gm12887B1AVM1 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Gm12887B1AVM1 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Gm12887B1AVM1 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Gm12887B1AVM1 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Gm12887B1AVM1 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Gm12887B1AVM1 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Gm12887B1AVM1 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Gm12887B1AVM1 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Gm12887B1AVM1 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Gm12887B1AVM1 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Gm12887B1AVM1 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Gm12887B1AVM1 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC10.61□□□□□ -0.71
Gm12887B1AVM1 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Gm12887B1AVM1 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Gm12887B1AVM1 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Gm12887B1AVM1 Mir3113-201ENSMUST00000175478 76 ntBASIC10.61□□□□□ -0.71
Gm12887B1AVM1 Gm24420-201ENSMUST00000176676 59 ntBASIC10.61□□□□□ -0.71
Gm12887B1AVM1 Gm9824-201ENSMUST00000178707 561 ntBASIC10.61□□□□□ -0.71
Gm12887B1AVM1 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Gm12887B1AVM1 Gm6283-201ENSMUST00000182369 1000 ntBASIC10.61□□□□□ -0.71
Gm12887B1AVM1 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC10.61□□□□□ -0.71
Gm12887B1AVM1 Gm18766-201ENSMUST00000189811 808 ntBASIC10.61□□□□□ -0.71
Gm12887B1AVM1 Gm45612-201ENSMUST00000211320 160 ntBASIC10.61□□□□□ -0.71
Gm12887B1AVM1 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Gm12887B1AVM1 Gm10819-201ENSMUST00000099988 561 ntBASIC10.61□□□□□ -0.71
Gm12887B1AVM1 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC10.61□□□□□ -0.71
Gm12887B1AVM1 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Gm12887B1AVM1 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Gm12887B1AVM1 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Gm12887B1AVM1 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Gm12887B1AVM1 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Gm12887B1AVM1 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Gm12887B1AVM1 AC131586.3-201ENSMUST00000228355 1367 ntBASIC10.61□□□□□ -0.71
Gm12887B1AVM1 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Gm12887B1AVM1 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Gm12887B1AVM1 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Gm12887B1AVM1 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Gm12887B1AVM1 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Gm12887B1AVM1 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Gm12887B1AVM1 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Gm12887B1AVM1 Rubie-203ENSMUST00000227803 2430 ntBASIC10.6□□□□□ -0.71
Gm12887B1AVM1 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Gm12887B1AVM1 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Gm12887B1AVM1 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Gm12887B1AVM1 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms