Protein–RNA interactions for Protein: A0A0G2LB96

Trbv29, T cell receptor beta, variable 29 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv29A0A0G2LB96 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trbv29A0A0G2LB96 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Trbv29A0A0G2LB96 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trbv29A0A0G2LB96 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trbv29A0A0G2LB96 Gm12485-201ENSMUST00000119641 291 ntBASIC10.93□□□□□ -0.66
Trbv29A0A0G2LB96 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trbv29A0A0G2LB96 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trbv29A0A0G2LB96 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trbv29A0A0G2LB96 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trbv29A0A0G2LB96 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trbv29A0A0G2LB96 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC10.93□□□□□ -0.66
Trbv29A0A0G2LB96 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trbv29A0A0G2LB96 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trbv29A0A0G2LB96 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trbv29A0A0G2LB96 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trbv29A0A0G2LB96 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trbv29A0A0G2LB96 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trbv29A0A0G2LB96 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trbv29A0A0G2LB96 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trbv29A0A0G2LB96 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trbv29A0A0G2LB96 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
Trbv29A0A0G2LB96 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trbv29A0A0G2LB96 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trbv29A0A0G2LB96 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trbv29A0A0G2LB96 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trbv29A0A0G2LB96 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trbv29A0A0G2LB96 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trbv29A0A0G2LB96 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trbv29A0A0G2LB96 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trbv29A0A0G2LB96 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trbv29A0A0G2LB96 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trbv29A0A0G2LB96 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Trbv29A0A0G2LB96 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trbv29A0A0G2LB96 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Trbv29A0A0G2LB96 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trbv29A0A0G2LB96 Gm42829-201ENSMUST00000198417 2585 ntBASIC10.92□□□□□ -0.66
Trbv29A0A0G2LB96 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trbv29A0A0G2LB96 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trbv29A0A0G2LB96 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trbv29A0A0G2LB96 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC10.92□□□□□ -0.66
Trbv29A0A0G2LB96 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trbv29A0A0G2LB96 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC10.92□□□□□ -0.66
Trbv29A0A0G2LB96 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trbv29A0A0G2LB96 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC10.92□□□□□ -0.66
Trbv29A0A0G2LB96 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC10.92□□□□□ -0.66
Trbv29A0A0G2LB96 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC10.92□□□□□ -0.66
Trbv29A0A0G2LB96 Gm9063-201ENSMUST00000223299 582 ntBASIC10.92□□□□□ -0.66
Trbv29A0A0G2LB96 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trbv29A0A0G2LB96 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Trbv29A0A0G2LB96 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trbv29A0A0G2LB96 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trbv29A0A0G2LB96 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trbv29A0A0G2LB96 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trbv29A0A0G2LB96 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC10.92□□□□□ -0.66
Trbv29A0A0G2LB96 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trbv29A0A0G2LB96 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trbv29A0A0G2LB96 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trbv29A0A0G2LB96 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trbv29A0A0G2LB96 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trbv29A0A0G2LB96 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trbv29A0A0G2LB96 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trbv29A0A0G2LB96 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trbv29A0A0G2LB96 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trbv29A0A0G2LB96 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC10.92□□□□□ -0.66
Trbv29A0A0G2LB96 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trbv29A0A0G2LB96 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trbv29A0A0G2LB96 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Trbv29A0A0G2LB96 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trbv29A0A0G2LB96 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trbv29A0A0G2LB96 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC10.91□□□□□ -0.66
Trbv29A0A0G2LB96 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trbv29A0A0G2LB96 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trbv29A0A0G2LB96 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trbv29A0A0G2LB96 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Trbv29A0A0G2LB96 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trbv29A0A0G2LB96 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trbv29A0A0G2LB96 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC10.91□□□□□ -0.66
Trbv29A0A0G2LB96 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC10.91□□□□□ -0.66
Trbv29A0A0G2LB96 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trbv29A0A0G2LB96 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trbv29A0A0G2LB96 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Trbv29A0A0G2LB96 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trbv29A0A0G2LB96 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trbv29A0A0G2LB96 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC10.91□□□□□ -0.66
Trbv29A0A0G2LB96 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC10.91□□□□□ -0.66
Trbv29A0A0G2LB96 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trbv29A0A0G2LB96 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC10.91□□□□□ -0.66
Trbv29A0A0G2LB96 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC10.91□□□□□ -0.66
Trbv29A0A0G2LB96 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trbv29A0A0G2LB96 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trbv29A0A0G2LB96 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trbv29A0A0G2LB96 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trbv29A0A0G2LB96 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Trbv29A0A0G2LB96 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC10.91□□□□□ -0.66
Trbv29A0A0G2LB96 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trbv29A0A0G2LB96 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trbv29A0A0G2LB96 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC10.91□□□□□ -0.66
Trbv29A0A0G2LB96 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC10.91□□□□□ -0.66
Trbv29A0A0G2LB96 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trbv29A0A0G2LB96 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 92.1 ms