Protein–RNA interactions for Protein: S4R2D1

Gm5493, Predicted gene 5493, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5493S4R2D1 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Gm5493S4R2D1 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Gm5493S4R2D1 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Gm5493S4R2D1 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
Gm5493S4R2D1 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC11.14□□□□□ -0.63
Gm5493S4R2D1 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Gm5493S4R2D1 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Gm5493S4R2D1 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Gm5493S4R2D1 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Gm5493S4R2D1 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Gm5493S4R2D1 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Gm5493S4R2D1 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Gm5493S4R2D1 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Gm5493S4R2D1 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Gm5493S4R2D1 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Gm5493S4R2D1 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Gm5493S4R2D1 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Gm5493S4R2D1 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Gm5493S4R2D1 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Gm5493S4R2D1 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Gm5493S4R2D1 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Gm5493S4R2D1 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Gm5493S4R2D1 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Gm5493S4R2D1 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Gm5493S4R2D1 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Gm5493S4R2D1 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Gm5493S4R2D1 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC11.13□□□□□ -0.63
Gm5493S4R2D1 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Gm5493S4R2D1 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Gm5493S4R2D1 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Gm5493S4R2D1 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Gm5493S4R2D1 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Gm5493S4R2D1 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Gm5493S4R2D1 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
Gm5493S4R2D1 Mir5131-201ENSMUST00000175426 93 ntBASIC11.13□□□□□ -0.63
Gm5493S4R2D1 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Gm5493S4R2D1 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Gm5493S4R2D1 Gm38225-201ENSMUST00000194001 393 ntBASIC11.13□□□□□ -0.63
Gm5493S4R2D1 Gm17968-201ENSMUST00000194902 784 ntBASIC11.13□□□□□ -0.63
Gm5493S4R2D1 Ighv1-25-201ENSMUST00000195638 345 ntBASIC11.13□□□□□ -0.63
Gm5493S4R2D1 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC11.13□□□□□ -0.63
Gm5493S4R2D1 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Gm5493S4R2D1 Gm45453-201ENSMUST00000211758 853 ntBASIC11.13□□□□□ -0.63
Gm5493S4R2D1 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC11.13□□□□□ -0.63
Gm5493S4R2D1 AC149588.3-201ENSMUST00000227515 150 ntBASIC11.13□□□□□ -0.63
Gm5493S4R2D1 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Gm5493S4R2D1 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Gm5493S4R2D1 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Gm5493S4R2D1 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Gm5493S4R2D1 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Gm5493S4R2D1 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Gm5493S4R2D1 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Gm5493S4R2D1 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Gm5493S4R2D1 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Gm5493S4R2D1 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Gm5493S4R2D1 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Gm5493S4R2D1 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Gm5493S4R2D1 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Gm5493S4R2D1 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Gm5493S4R2D1 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Gm5493S4R2D1 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC11.13□□□□□ -0.63
Gm5493S4R2D1 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Gm5493S4R2D1 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Gm5493S4R2D1 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Gm5493S4R2D1 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Gm5493S4R2D1 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Gm5493S4R2D1 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Gm5493S4R2D1 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Gm5493S4R2D1 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC11.12□□□□□ -0.63
Gm5493S4R2D1 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC11.12□□□□□ -0.63
Gm5493S4R2D1 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC11.12□□□□□ -0.63
Gm5493S4R2D1 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Gm5493S4R2D1 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Gm5493S4R2D1 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Gm5493S4R2D1 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Gm5493S4R2D1 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Gm5493S4R2D1 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Gm5493S4R2D1 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC11.12□□□□□ -0.63
Gm5493S4R2D1 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Gm5493S4R2D1 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Gm5493S4R2D1 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Gm5493S4R2D1 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Gm5493S4R2D1 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Gm5493S4R2D1 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Gm5493S4R2D1 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Gm5493S4R2D1 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Gm5493S4R2D1 AC124751.1-201ENSMUST00000222716 1408 ntBASIC11.12□□□□□ -0.63
Gm5493S4R2D1 AC154527.4-201ENSMUST00000224364 1667 ntBASIC11.12□□□□□ -0.63
Gm5493S4R2D1 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC11.12□□□□□ -0.63
Gm5493S4R2D1 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Gm5493S4R2D1 Gm12892-201ENSMUST00000117367 1146 ntBASIC11.12□□□□□ -0.63
Gm5493S4R2D1 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC11.12□□□□□ -0.63
Gm5493S4R2D1 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC11.12□□□□□ -0.63
Gm5493S4R2D1 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
Gm5493S4R2D1 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Gm5493S4R2D1 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Gm5493S4R2D1 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC11.12□□□□□ -0.63
Gm5493S4R2D1 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Gm5493S4R2D1 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Gm5493S4R2D1 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms