Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
H2afb2S4R1M3 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
H2afb2S4R1M3 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
H2afb2S4R1M3 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
H2afb2S4R1M3 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
H2afb2S4R1M3 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
H2afb2S4R1M3 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC13.18□□□□□ -0.3
H2afb2S4R1M3 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
H2afb2S4R1M3 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC13.18□□□□□ -0.3
H2afb2S4R1M3 Gm5687-201ENSMUST00000118252 640 ntBASIC13.18□□□□□ -0.3
H2afb2S4R1M3 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC13.18□□□□□ -0.3
H2afb2S4R1M3 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
H2afb2S4R1M3 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
H2afb2S4R1M3 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
H2afb2S4R1M3 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
H2afb2S4R1M3 Gm5276-201ENSMUST00000196683 1047 ntBASIC13.18□□□□□ -0.3
H2afb2S4R1M3 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
H2afb2S4R1M3 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
H2afb2S4R1M3 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
H2afb2S4R1M3 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
H2afb2S4R1M3 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC13.18□□□□□ -0.3
H2afb2S4R1M3 Gm5385-201ENSMUST00000118988 1559 ntBASIC13.18□□□□□ -0.3
H2afb2S4R1M3 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
H2afb2S4R1M3 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
H2afb2S4R1M3 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
H2afb2S4R1M3 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
H2afb2S4R1M3 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
H2afb2S4R1M3 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
H2afb2S4R1M3 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
H2afb2S4R1M3 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
H2afb2S4R1M3 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
H2afb2S4R1M3 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
H2afb2S4R1M3 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
H2afb2S4R1M3 Gm18630-201ENSMUST00000222109 1397 ntBASIC13.18□□□□□ -0.3
H2afb2S4R1M3 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
H2afb2S4R1M3 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC13.18□□□□□ -0.3
H2afb2S4R1M3 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
H2afb2S4R1M3 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
H2afb2S4R1M3 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
H2afb2S4R1M3 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
H2afb2S4R1M3 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
H2afb2S4R1M3 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
H2afb2S4R1M3 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
H2afb2S4R1M3 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
H2afb2S4R1M3 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
H2afb2S4R1M3 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
H2afb2S4R1M3 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
H2afb2S4R1M3 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC13.17□□□□□ -0.3
H2afb2S4R1M3 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
H2afb2S4R1M3 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC13.17□□□□□ -0.3
H2afb2S4R1M3 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC13.17□□□□□ -0.3
H2afb2S4R1M3 AC155252.1-201ENSMUST00000226462 1208 ntBASIC13.17□□□□□ -0.3
H2afb2S4R1M3 AC125117.1-201ENSMUST00000228121 468 ntBASIC13.17□□□□□ -0.3
H2afb2S4R1M3 AC154276.1-201ENSMUST00000228874 1299 ntBASIC13.17□□□□□ -0.3
H2afb2S4R1M3 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
H2afb2S4R1M3 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
H2afb2S4R1M3 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
H2afb2S4R1M3 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC13.17□□□□□ -0.3
H2afb2S4R1M3 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC13.17□□□□□ -0.3
H2afb2S4R1M3 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
H2afb2S4R1M3 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
H2afb2S4R1M3 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
H2afb2S4R1M3 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
H2afb2S4R1M3 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
H2afb2S4R1M3 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
H2afb2S4R1M3 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
H2afb2S4R1M3 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
H2afb2S4R1M3 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
H2afb2S4R1M3 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
H2afb2S4R1M3 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
H2afb2S4R1M3 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
H2afb2S4R1M3 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC13.16□□□□□ -0.3
H2afb2S4R1M3 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
H2afb2S4R1M3 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
H2afb2S4R1M3 Gm7002-201ENSMUST00000221386 2165 ntBASIC13.16□□□□□ -0.3
H2afb2S4R1M3 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
H2afb2S4R1M3 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC13.16□□□□□ -0.3
H2afb2S4R1M3 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC13.16□□□□□ -0.3
H2afb2S4R1M3 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
H2afb2S4R1M3 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC13.16□□□□□ -0.3
H2afb2S4R1M3 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
H2afb2S4R1M3 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
H2afb2S4R1M3 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
H2afb2S4R1M3 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
H2afb2S4R1M3 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
H2afb2S4R1M3 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC13.16□□□□□ -0.3
H2afb2S4R1M3 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
H2afb2S4R1M3 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
H2afb2S4R1M3 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
H2afb2S4R1M3 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
H2afb2S4R1M3 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
H2afb2S4R1M3 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC13.15□□□□□ -0.3
H2afb2S4R1M3 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
H2afb2S4R1M3 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
H2afb2S4R1M3 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
H2afb2S4R1M3 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
H2afb2S4R1M3 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
H2afb2S4R1M3 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
H2afb2S4R1M3 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
H2afb2S4R1M3 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms