Protein–RNA interactions for Protein: Q9JIH2

Nup50, Nuclear pore complex protein Nup50, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup50Q9JIH2 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nup50Q9JIH2 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nup50Q9JIH2 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC13.91□□□□□ -0.18
Nup50Q9JIH2 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nup50Q9JIH2 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Nup50Q9JIH2 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Nup50Q9JIH2 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Nup50Q9JIH2 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nup50Q9JIH2 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Nup50Q9JIH2 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC13.91□□□□□ -0.18
Nup50Q9JIH2 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Nup50Q9JIH2 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Nup50Q9JIH2 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Nup50Q9JIH2 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Nup50Q9JIH2 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Nup50Q9JIH2 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
Nup50Q9JIH2 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Nup50Q9JIH2 Gm28323-201ENSMUST00000186817 2499 ntBASIC13.9□□□□□ -0.18
Nup50Q9JIH2 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nup50Q9JIH2 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nup50Q9JIH2 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Nup50Q9JIH2 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Nup50Q9JIH2 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Nup50Q9JIH2 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nup50Q9JIH2 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Nup50Q9JIH2 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nup50Q9JIH2 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
Nup50Q9JIH2 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nup50Q9JIH2 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC13.9□□□□□ -0.18
Nup50Q9JIH2 Gm5687-201ENSMUST00000118252 640 ntBASIC13.9□□□□□ -0.18
Nup50Q9JIH2 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nup50Q9JIH2 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC13.9□□□□□ -0.18
Nup50Q9JIH2 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Nup50Q9JIH2 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC13.9□□□□□ -0.18
Nup50Q9JIH2 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nup50Q9JIH2 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC13.9□□□□□ -0.18
Nup50Q9JIH2 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nup50Q9JIH2 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Nup50Q9JIH2 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC13.9□□□□□ -0.18
Nup50Q9JIH2 Abhd6-203ENSMUST00000225234 1958 ntBASIC13.9□□□□□ -0.18
Nup50Q9JIH2 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nup50Q9JIH2 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Nup50Q9JIH2 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nup50Q9JIH2 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nup50Q9JIH2 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Nup50Q9JIH2 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nup50Q9JIH2 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nup50Q9JIH2 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nup50Q9JIH2 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Nup50Q9JIH2 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nup50Q9JIH2 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Nup50Q9JIH2 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Nup50Q9JIH2 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nup50Q9JIH2 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nup50Q9JIH2 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nup50Q9JIH2 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Nup50Q9JIH2 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Nup50Q9JIH2 Gm18630-201ENSMUST00000222109 1397 ntBASIC13.89□□□□□ -0.19
Nup50Q9JIH2 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nup50Q9JIH2 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nup50Q9JIH2 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Nup50Q9JIH2 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nup50Q9JIH2 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Nup50Q9JIH2 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nup50Q9JIH2 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC13.89□□□□□ -0.19
Nup50Q9JIH2 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC13.89□□□□□ -0.19
Nup50Q9JIH2 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Nup50Q9JIH2 Gm28631-201ENSMUST00000190740 334 ntBASIC13.89□□□□□ -0.19
Nup50Q9JIH2 Gm6983-201ENSMUST00000214912 628 ntBASIC13.89□□□□□ -0.19
Nup50Q9JIH2 AC122305.4-201ENSMUST00000216159 1206 ntBASIC13.89□□□□□ -0.19
Nup50Q9JIH2 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nup50Q9JIH2 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nup50Q9JIH2 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nup50Q9JIH2 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nup50Q9JIH2 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nup50Q9JIH2 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nup50Q9JIH2 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
Nup50Q9JIH2 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nup50Q9JIH2 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Nup50Q9JIH2 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Nup50Q9JIH2 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Nup50Q9JIH2 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Nup50Q9JIH2 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nup50Q9JIH2 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Nup50Q9JIH2 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nup50Q9JIH2 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nup50Q9JIH2 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nup50Q9JIH2 Gm17435-202ENSMUST00000212699 1998 ntBASIC13.89□□□□□ -0.19
Nup50Q9JIH2 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC13.89□□□□□ -0.19
Nup50Q9JIH2 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nup50Q9JIH2 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nup50Q9JIH2 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Nup50Q9JIH2 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nup50Q9JIH2 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nup50Q9JIH2 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC13.88□□□□□ -0.19
Nup50Q9JIH2 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Nup50Q9JIH2 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Nup50Q9JIH2 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nup50Q9JIH2 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nup50Q9JIH2 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms