Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tubb3Q9ERD7 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tubb3Q9ERD7 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tubb3Q9ERD7 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tubb3Q9ERD7 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Tubb3Q9ERD7 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC13.11□□□□□ -0.31
Tubb3Q9ERD7 Gm28323-201ENSMUST00000186817 2499 ntBASIC13.11□□□□□ -0.31
Tubb3Q9ERD7 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tubb3Q9ERD7 Gm15222-202ENSMUST00000228667 1726 ntBASIC13.1□□□□□ -0.31
Tubb3Q9ERD7 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Tubb3Q9ERD7 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tubb3Q9ERD7 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tubb3Q9ERD7 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tubb3Q9ERD7 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tubb3Q9ERD7 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tubb3Q9ERD7 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tubb3Q9ERD7 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tubb3Q9ERD7 AC241621.2-201ENSMUST00000223991 2151 ntBASIC13.1□□□□□ -0.31
Tubb3Q9ERD7 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tubb3Q9ERD7 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Tubb3Q9ERD7 Mir692-1-201ENSMUST00000102263 109 ntBASIC13.1□□□□□ -0.31
Tubb3Q9ERD7 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Tubb3Q9ERD7 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC13.1□□□□□ -0.31
Tubb3Q9ERD7 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC13.1□□□□□ -0.31
Tubb3Q9ERD7 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC13.1□□□□□ -0.31
Tubb3Q9ERD7 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC13.1□□□□□ -0.31
Tubb3Q9ERD7 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC13.1□□□□□ -0.31
Tubb3Q9ERD7 Gm27772-201ENSMUST00000184900 187 ntBASIC13.1□□□□□ -0.31
Tubb3Q9ERD7 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC13.1□□□□□ -0.31
Tubb3Q9ERD7 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC13.1□□□□□ -0.31
Tubb3Q9ERD7 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC13.1□□□□□ -0.31
Tubb3Q9ERD7 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Tubb3Q9ERD7 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tubb3Q9ERD7 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tubb3Q9ERD7 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.1□□□□□ -0.31
Tubb3Q9ERD7 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tubb3Q9ERD7 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tubb3Q9ERD7 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tubb3Q9ERD7 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tubb3Q9ERD7 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tubb3Q9ERD7 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tubb3Q9ERD7 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tubb3Q9ERD7 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tubb3Q9ERD7 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tubb3Q9ERD7 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tubb3Q9ERD7 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tubb3Q9ERD7 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Tubb3Q9ERD7 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Tubb3Q9ERD7 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tubb3Q9ERD7 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Tubb3Q9ERD7 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tubb3Q9ERD7 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Tubb3Q9ERD7 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
Tubb3Q9ERD7 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Tubb3Q9ERD7 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tubb3Q9ERD7 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Tubb3Q9ERD7 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC13.09□□□□□ -0.31
Tubb3Q9ERD7 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Tubb3Q9ERD7 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Tubb3Q9ERD7 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Tubb3Q9ERD7 Gm19078-201ENSMUST00000206311 727 ntBASIC13.09□□□□□ -0.31
Tubb3Q9ERD7 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tubb3Q9ERD7 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tubb3Q9ERD7 Gm3695-201ENSMUST00000087222 1009 ntBASIC13.09□□□□□ -0.31
Tubb3Q9ERD7 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Tubb3Q9ERD7 Gm42863-201ENSMUST00000197875 2958 ntBASIC13.09□□□□□ -0.31
Tubb3Q9ERD7 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tubb3Q9ERD7 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tubb3Q9ERD7 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tubb3Q9ERD7 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tubb3Q9ERD7 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC13.09□□□□□ -0.31
Tubb3Q9ERD7 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tubb3Q9ERD7 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC13.09□□□□□ -0.31
Tubb3Q9ERD7 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tubb3Q9ERD7 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Tubb3Q9ERD7 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Tubb3Q9ERD7 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Tubb3Q9ERD7 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tubb3Q9ERD7 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tubb3Q9ERD7 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tubb3Q9ERD7 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.08□□□□□ -0.32
Tubb3Q9ERD7 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tubb3Q9ERD7 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tubb3Q9ERD7 Gm11524-201ENSMUST00000119349 807 ntBASIC13.08□□□□□ -0.32
Tubb3Q9ERD7 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Tubb3Q9ERD7 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC13.08□□□□□ -0.32
Tubb3Q9ERD7 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Tubb3Q9ERD7 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Tubb3Q9ERD7 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Tubb3Q9ERD7 Gm43094-201ENSMUST00000196549 921 ntBASIC13.08□□□□□ -0.32
Tubb3Q9ERD7 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC13.08□□□□□ -0.32
Tubb3Q9ERD7 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Tubb3Q9ERD7 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC13.08□□□□□ -0.32
Tubb3Q9ERD7 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tubb3Q9ERD7 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC13.08□□□□□ -0.32
Tubb3Q9ERD7 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tubb3Q9ERD7 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tubb3Q9ERD7 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tubb3Q9ERD7 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tubb3Q9ERD7 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms