Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 Gm45643-201ENSMUST00000211364 1484 ntBASIC17.94■□□□□ 0.46
Cpsf1Q9EPU4 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cpsf1Q9EPU4 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC17.94■□□□□ 0.46
Cpsf1Q9EPU4 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC17.94■□□□□ 0.46
Cpsf1Q9EPU4 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cpsf1Q9EPU4 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC17.94■□□□□ 0.46
Cpsf1Q9EPU4 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC17.94■□□□□ 0.46
Cpsf1Q9EPU4 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Cpsf1Q9EPU4 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cpsf1Q9EPU4 Gm10434-201ENSMUST00000101158 471 ntBASIC17.94■□□□□ 0.46
Cpsf1Q9EPU4 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cpsf1Q9EPU4 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC17.94■□□□□ 0.46
Cpsf1Q9EPU4 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cpsf1Q9EPU4 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC17.94■□□□□ 0.46
Cpsf1Q9EPU4 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Cpsf1Q9EPU4 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cpsf1Q9EPU4 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Cpsf1Q9EPU4 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cpsf1Q9EPU4 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cpsf1Q9EPU4 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cpsf1Q9EPU4 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cpsf1Q9EPU4 Ptprs-211ENSMUST00000223859 5588 ntBASIC17.94■□□□□ 0.46
Cpsf1Q9EPU4 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC17.94■□□□□ 0.46
Cpsf1Q9EPU4 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cpsf1Q9EPU4 Gm37737-201ENSMUST00000195013 1638 ntBASIC17.94■□□□□ 0.46
Cpsf1Q9EPU4 Gm38391-201ENSMUST00000191720 4069 ntBASIC17.94■□□□□ 0.46
Cpsf1Q9EPU4 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cpsf1Q9EPU4 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Cpsf1Q9EPU4 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cpsf1Q9EPU4 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Cpsf1Q9EPU4 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cpsf1Q9EPU4 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cpsf1Q9EPU4 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cpsf1Q9EPU4 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Cpsf1Q9EPU4 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cpsf1Q9EPU4 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cpsf1Q9EPU4 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC17.93■□□□□ 0.46
Cpsf1Q9EPU4 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Cpsf1Q9EPU4 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Cpsf1Q9EPU4 AC159747.1-201ENSMUST00000219903 265 ntBASIC17.93■□□□□ 0.46
Cpsf1Q9EPU4 AC167013.1-201ENSMUST00000228592 202 ntBASIC17.93■□□□□ 0.46
Cpsf1Q9EPU4 CT025533.2-201ENSMUST00000228715 1248 ntBASIC17.93■□□□□ 0.46
Cpsf1Q9EPU4 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cpsf1Q9EPU4 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Cpsf1Q9EPU4 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Cpsf1Q9EPU4 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Cpsf1Q9EPU4 Gm8617-201ENSMUST00000118796 2222 ntBASIC17.93■□□□□ 0.46
Cpsf1Q9EPU4 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cpsf1Q9EPU4 Gm37691-201ENSMUST00000192147 2573 ntBASIC17.93■□□□□ 0.46
Cpsf1Q9EPU4 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cpsf1Q9EPU4 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Cpsf1Q9EPU4 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Cpsf1Q9EPU4 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cpsf1Q9EPU4 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cpsf1Q9EPU4 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cpsf1Q9EPU4 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cpsf1Q9EPU4 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cpsf1Q9EPU4 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cpsf1Q9EPU4 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Cpsf1Q9EPU4 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cpsf1Q9EPU4 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC17.92■□□□□ 0.46
Cpsf1Q9EPU4 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cpsf1Q9EPU4 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cpsf1Q9EPU4 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Cpsf1Q9EPU4 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC17.92■□□□□ 0.46
Cpsf1Q9EPU4 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC17.92■□□□□ 0.46
Cpsf1Q9EPU4 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC17.92■□□□□ 0.46
Cpsf1Q9EPU4 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cpsf1Q9EPU4 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Cpsf1Q9EPU4 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cpsf1Q9EPU4 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Cpsf1Q9EPU4 Gm14381-201ENSMUST00000122105 414 ntBASIC17.92■□□□□ 0.46
Cpsf1Q9EPU4 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC17.92■□□□□ 0.46
Cpsf1Q9EPU4 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
Cpsf1Q9EPU4 Gm29199-201ENSMUST00000187766 775 ntBASIC17.92■□□□□ 0.46
Cpsf1Q9EPU4 Gm18827-201ENSMUST00000188341 790 ntBASIC17.92■□□□□ 0.46
Cpsf1Q9EPU4 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Cpsf1Q9EPU4 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC17.92■□□□□ 0.46
Cpsf1Q9EPU4 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cpsf1Q9EPU4 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC17.92■□□□□ 0.46
Cpsf1Q9EPU4 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cpsf1Q9EPU4 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cpsf1Q9EPU4 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cpsf1Q9EPU4 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cpsf1Q9EPU4 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cpsf1Q9EPU4 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cpsf1Q9EPU4 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC17.92■□□□□ 0.46
Cpsf1Q9EPU4 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
Cpsf1Q9EPU4 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
Cpsf1Q9EPU4 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Cpsf1Q9EPU4 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Cpsf1Q9EPU4 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cpsf1Q9EPU4 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC17.92■□□□□ 0.46
Cpsf1Q9EPU4 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Cpsf1Q9EPU4 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cpsf1Q9EPU4 Gm44207-201ENSMUST00000204568 1424 ntBASIC17.92■□□□□ 0.46
Cpsf1Q9EPU4 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC17.92■□□□□ 0.46
Cpsf1Q9EPU4 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC17.92■□□□□ 0.46
Cpsf1Q9EPU4 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cpsf1Q9EPU4 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms