Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
U2af1Q9D883 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
U2af1Q9D883 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
U2af1Q9D883 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
U2af1Q9D883 Mir874-201ENSMUST00000104769 76 ntBASIC17.3■□□□□ 0.36
U2af1Q9D883 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
U2af1Q9D883 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC17.3■□□□□ 0.36
U2af1Q9D883 Gm8062-201ENSMUST00000139696 444 ntBASIC17.3■□□□□ 0.36
U2af1Q9D883 Gm26927-201ENSMUST00000182385 965 ntBASIC17.3■□□□□ 0.36
U2af1Q9D883 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC17.3■□□□□ 0.36
U2af1Q9D883 Tyms-ps-201ENSMUST00000219550 915 ntBASIC17.3■□□□□ 0.36
U2af1Q9D883 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
U2af1Q9D883 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
U2af1Q9D883 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
U2af1Q9D883 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
U2af1Q9D883 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC17.3■□□□□ 0.36
U2af1Q9D883 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
U2af1Q9D883 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
U2af1Q9D883 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
U2af1Q9D883 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
U2af1Q9D883 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
U2af1Q9D883 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
U2af1Q9D883 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
U2af1Q9D883 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
U2af1Q9D883 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
U2af1Q9D883 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC17.3■□□□□ 0.36
U2af1Q9D883 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
U2af1Q9D883 Gm9200-201ENSMUST00000118513 1354 ntBASIC17.29■□□□□ 0.36
U2af1Q9D883 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
U2af1Q9D883 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
U2af1Q9D883 AC139054.1-201ENSMUST00000226898 1598 ntBASIC17.29■□□□□ 0.36
U2af1Q9D883 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
U2af1Q9D883 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
U2af1Q9D883 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC17.29■□□□□ 0.36
U2af1Q9D883 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
U2af1Q9D883 Mir686-201ENSMUST00000102174 109 ntBASIC17.29■□□□□ 0.36
U2af1Q9D883 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC17.29■□□□□ 0.36
U2af1Q9D883 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
U2af1Q9D883 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC17.29■□□□□ 0.36
U2af1Q9D883 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
U2af1Q9D883 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
U2af1Q9D883 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
U2af1Q9D883 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
U2af1Q9D883 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
U2af1Q9D883 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC17.29■□□□□ 0.36
U2af1Q9D883 Gm8706-201ENSMUST00000197372 1491 ntBASIC17.29■□□□□ 0.36
U2af1Q9D883 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
U2af1Q9D883 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
U2af1Q9D883 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
U2af1Q9D883 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
U2af1Q9D883 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
U2af1Q9D883 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
U2af1Q9D883 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
U2af1Q9D883 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
U2af1Q9D883 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
U2af1Q9D883 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC17.28■□□□□ 0.36
U2af1Q9D883 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
U2af1Q9D883 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
U2af1Q9D883 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
U2af1Q9D883 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
U2af1Q9D883 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
U2af1Q9D883 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
U2af1Q9D883 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
U2af1Q9D883 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
U2af1Q9D883 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
U2af1Q9D883 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC17.28■□□□□ 0.36
U2af1Q9D883 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
U2af1Q9D883 Gm27514-201ENSMUST00000183692 110 ntBASIC17.28■□□□□ 0.36
U2af1Q9D883 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
U2af1Q9D883 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
U2af1Q9D883 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
U2af1Q9D883 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
U2af1Q9D883 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
U2af1Q9D883 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
U2af1Q9D883 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC17.28■□□□□ 0.36
U2af1Q9D883 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
U2af1Q9D883 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
U2af1Q9D883 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC17.28■□□□□ 0.36
U2af1Q9D883 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
U2af1Q9D883 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
U2af1Q9D883 Gm18244-201ENSMUST00000219747 1566 ntBASIC17.28■□□□□ 0.36
U2af1Q9D883 Gm12846-201ENSMUST00000120431 1373 ntBASIC17.28■□□□□ 0.36
U2af1Q9D883 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
U2af1Q9D883 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
U2af1Q9D883 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
U2af1Q9D883 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
U2af1Q9D883 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC17.27■□□□□ 0.36
U2af1Q9D883 Gm5620-201ENSMUST00000077991 1348 ntBASIC17.27■□□□□ 0.36
U2af1Q9D883 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
U2af1Q9D883 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
U2af1Q9D883 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
U2af1Q9D883 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
U2af1Q9D883 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
U2af1Q9D883 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
U2af1Q9D883 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC17.27■□□□□ 0.36
U2af1Q9D883 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC17.27■□□□□ 0.36
U2af1Q9D883 Gm5370-201ENSMUST00000187187 574 ntBASIC17.27■□□□□ 0.36
U2af1Q9D883 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
U2af1Q9D883 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
U2af1Q9D883 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms